RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SASH3O75995 380 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 BRD1O95696 1058 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 PYGLP06737 847 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 CDC25BP30305 580 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 PEX19P40855 299 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 IQCB1Q15051 598 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 ACBD5Q5T8D3 534 aaPredicted RBP9.94□□□□□ -0.82
TDP1-201ENST00000335725 MFN1Q8IWA4 741 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 SPDL1Q96EA4 605 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 RMDN2Q96LZ7 410 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 TRIM7Q9C029 511 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 ADAMTS8Q9UP79 889 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 AK9Q5TCS8 1911 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 FMNL1O95466 1100 aaPredicted RBP9.94□□□□□ -0.82
TDP1-201ENST00000335725 SNX1Q13596 522 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 NUP133Q8WUM0 1156 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 OSBPL9Q96SU4 736 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 H7C1W4 665 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 MICALCLQ6ZW33 695 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 NBPF15Q8N660 670 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 TMEM87AQ8NBN3 555 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 SPDYE1Q8NFV5 336 aaPredicted RBP9.94□□□□□ -0.82
TDP1-201ENST00000335725 ARPC5LQ9BPX5 153 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 SYNPO2Q9UMS6 1093 aa9.94□□□□□ -0.82
TDP1-201ENST00000335725 AHCYL1O43865 530 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 ALDH1B1P30837 517 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 GBP2P32456 591 aaPredicted RBP9.93□□□□□ -0.82
TDP1-201ENST00000335725 DHX8Q14562 1220 aaKnown RBP9.93□□□□□ -0.82
TDP1-201ENST00000335725 CCAR2Q8N163 923 aaKnown RBP9.93□□□□□ -0.82
TDP1-201ENST00000335725 B4GALNT2Q8NHY0 566 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 FAM81AQ8TBF8 368 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 AGAP3Q96P47 875 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 FUT8Q9BYC5 575 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 CWC25Q9NXE8 425 aaPredicted RBP9.93□□□□□ -0.82
TDP1-201ENST00000335725 UTP6Q9NYH9 597 aaKnown RBP9.93□□□□□ -0.82
TDP1-201ENST00000335725 FAM169AQ9Y6X4 670 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 AATKQ6ZMQ8 1374 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 EXOC5O00471 708 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 RANBP1P43487 201 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 UBE2HP62256 183 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 APOBRQ0VD83 1088 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 BRD3Q15059 726 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 RRP12Q5JTH9 1297 aaKnown RBP9.93□□□□□ -0.82
TDP1-201ENST00000335725 MAB21L3Q8N8X9 362 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 FAM71BQ8TC56 605 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 CACTINQ8WUQ7 758 aaKnown RBP9.93□□□□□ -0.82
TDP1-201ENST00000335725 INCENPQ9NQS7 918 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 FRMD4BQ9Y2L6 1034 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 AP5Z1O43299 807 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 NAT1P18440 290 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 ZNF75DP51815 510 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 ARMC3Q5W041 872 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 CDCA2Q69YH5 1023 aaPredicted RBP9.93□□□□□ -0.82
TDP1-201ENST00000335725 HDXQ7Z353 690 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 MPHOSPH9Q99550 1183 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 FUCA2Q9BTY2 467 aa9.93□□□□□ -0.82
TDP1-201ENST00000335725 MCM2P49736 904 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 CEP85LQ5SZL2 805 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 SPATS2Q86XZ4 545 aaKnown RBP9.92□□□□□ -0.82
TDP1-201ENST00000335725 LRRC8AQ8IWT6 810 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 SLX1AQ9BQ83 275 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 IRX2Q9BZI1 471 aaPredicted RBP9.92□□□□□ -0.82
TDP1-201ENST00000335725 ATP6V0A4Q9HBG4 840 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 ATXN2Q99700 1313 aaKnown RBP9.92□□□□□ -0.82
TDP1-201ENST00000335725 FGD6Q6ZV73 1430 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 KIAA0754O94854 1291 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 PYGBP11216 843 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 LRRC23Q53EV4 343 aaPredicted RBP9.92□□□□□ -0.82
TDP1-201ENST00000335725 USP48Q86UV5 1035 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 PLXNC1O60486 1568 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 CCDC151A5D8V7 595 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 SLC30A9Q6PML9 568 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 CCDC114Q96M63 670 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 FMNL2Q96PY5 1086 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 CAPN7Q9Y6W3 813 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 KDRP35968 1356 aa9.92□□□□□ -0.82
TDP1-201ENST00000335725 SMAPO00193 183 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 MAP2K7O14733 419 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 OPA1O60313 960 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 ERLIN1O75477 346 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 MYSM1Q5VVJ2 828 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 FAM114A1Q8IWE2 563 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 OGFOD1Q8N543 542 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 CNNM3Q8NE01 707 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 CXorf38Q8TB03 319 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 MAGEC3Q8TD91 643 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 H3BQF6 201 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 FCHSD2O94868 740 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 FESP07332 822 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 SLC8A1P32418 973 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 NEXNQ0ZGT2 675 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 LRRFIP1Q32MZ4 808 aaKnown RBP9.91□□□□□ -0.82
TDP1-201ENST00000335725 ISM2Q6H9L7 571 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 GET4Q7L5D6 327 aaPredicted RBP9.91□□□□□ -0.82
TDP1-201ENST00000335725 PLA2G4DQ86XP0 818 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 ZGPATQ8N5A5 531 aaKnown RBP9.91□□□□□ -0.82
TDP1-201ENST00000335725 SHTN1A0MZ66 631 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 TADA3O75528 432 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 DTNBP1Q96EV8 351 aa9.91□□□□□ -0.82
TDP1-201ENST00000335725 TSGA10Q9BZW7 698 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms