RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 GAS2L3Q86XJ1 694 aa28.29■■■□□ 2.12
ITM2C-203ENST00000335005 TM6SF1Q9BZW5 370 aa28.29■■■□□ 2.12
ITM2C-203ENST00000335005 TOGARAM1Q9Y4F4 1720 aa28.28■■■□□ 2.12
ITM2C-203ENST00000335005 PTPN12Q05209 780 aaKnown RBP28.27■■■□□ 2.12
ITM2C-203ENST00000335005 PANK2Q9BZ23 570 aa28.27■■■□□ 2.12
ITM2C-203ENST00000335005 CCDC8Q9H0W5 538 aaPredicted RBP28.27■■■□□ 2.12
ITM2C-203ENST00000335005 SIL1Q9H173 461 aa28.27■■■□□ 2.12
ITM2C-203ENST00000335005 TLR7Q9NYK1 1049 aaKnown RBP28.27■■■□□ 2.12
ITM2C-203ENST00000335005 CCDC171Q6TFL3 1326 aa28.27■■■□□ 2.12
ITM2C-203ENST00000335005 NBPF26B4DH59 902 aa28.27■■■□□ 2.12
ITM2C-203ENST00000335005 PIP4K2AP48426 406 aaPredicted RBP28.27■■■□□ 2.12
ITM2C-203ENST00000335005 PTH1RQ03431 593 aa28.27■■■□□ 2.12
ITM2C-203ENST00000335005 NBPF14Q5TI25 921 aa28.27■■■□□ 2.12
ITM2C-203ENST00000335005 NBPF10Q6P3W6 841 aaKnown RBP28.27■■■□□ 2.12
ITM2C-203ENST00000335005 NBPF15Q8N660 670 aa28.27■■■□□ 2.12
ITM2C-203ENST00000335005 JCADQ9P266 1359 aa28.26■■■□□ 2.11
ITM2C-203ENST00000335005 IL2RBP14784 551 aa28.26■■■□□ 2.11
ITM2C-203ENST00000335005 UBE3BQ7Z3V4 1068 aa28.26■■■□□ 2.11
ITM2C-203ENST00000335005 KLHDC4Q8TBB5 520 aa28.26■■■□□ 2.11
ITM2C-203ENST00000335005 RFX7Q2KHR2 1363 aa28.25■■■□□ 2.11
ITM2C-203ENST00000335005 ZNF445P59923 1031 aa28.25■■■□□ 2.11
ITM2C-203ENST00000335005 NECTIN1Q15223 517 aa28.25■■■□□ 2.11
ITM2C-203ENST00000335005 MED23Q9ULK4 1368 aa28.24■■■□□ 2.11
ITM2C-203ENST00000335005 A0A087WZG4 1122 aa28.24■■■□□ 2.11
ITM2C-203ENST00000335005 NOL8Q76FK4 1167 aaKnown RBP28.24■■■□□ 2.11
ITM2C-203ENST00000335005 ARXQ96QS3 562 aa28.24■■■□□ 2.11
ITM2C-203ENST00000335005 LIMCH1Q9UPQ0 1083 aa28.24■■■□□ 2.11
ITM2C-203ENST00000335005 AK2P54819 239 aa28.23■■■□□ 2.11
ITM2C-203ENST00000335005 H7C1W4 665 aa28.23■■■□□ 2.11
ITM2C-203ENST00000335005 ATP5JP18859 108 aa28.23■■■□□ 2.11
ITM2C-203ENST00000335005 NMIQ13287 307 aaPredicted RBP28.23■■■□□ 2.11
ITM2C-203ENST00000335005 MAP4K1Q92918 833 aa28.23■■■□□ 2.11
ITM2C-203ENST00000335005 ZSWIM6Q9HCJ5 1215 aa28.23■■■□□ 2.11
ITM2C-203ENST00000335005 RTN4Q9NQC3 1192 aaKnown RBP28.23■■■□□ 2.11
ITM2C-203ENST00000335005 TNNI3KQ59H18 835 aa28.22■■■□□ 2.11
ITM2C-203ENST00000335005 VPS53Q5VIR6 699 aa28.22■■■□□ 2.11
ITM2C-203ENST00000335005 RUFY3Q7L099 469 aa28.22■■■□□ 2.11
ITM2C-203ENST00000335005 FPGT-TNNI3KV9GXZ4 949 aa28.22■■■□□ 2.11
ITM2C-203ENST00000335005 WDR33Q9C0J8 1336 aaKnown RBP28.21■■■□□ 2.11
ITM2C-203ENST00000335005 ZNF335Q9H4Z2 1342 aaPredicted RBP28.21■■■□□ 2.11
ITM2C-203ENST00000335005 ATP5J2-PTCD1G3V325 749 aa28.21■■■□□ 2.11
ITM2C-203ENST00000335005 PTCD1O75127 700 aaKnown RBP28.21■■■□□ 2.11
ITM2C-203ENST00000335005 PRPF40AO75400 957 aaKnown RBP28.21■■■□□ 2.11
ITM2C-203ENST00000335005 BOLA2Q9H3K6 86 aa28.21■■■□□ 2.11
ITM2C-203ENST00000335005 RPAP1Q9BWH6 1393 aaPredicted RBP28.2■■■□□ 2.11
ITM2C-203ENST00000335005 CASTP20810 708 aaKnown RBP28.2■■■□□ 2.1
ITM2C-203ENST00000335005 FAM227BQ96M60 508 aa28.2■■■□□ 2.1
ITM2C-203ENST00000335005 PRPF40BQ6NWY9 871 aaKnown RBP28.19■■■□□ 2.1
ITM2C-203ENST00000335005 GPT2Q8TD30 523 aa28.19■■■□□ 2.1
ITM2C-203ENST00000335005 DBNLQ9UJU6 430 aaKnown RBP28.19■■■□□ 2.1
ITM2C-203ENST00000335005 RBM8AQ9Y5S9 174 aaKnown RBP28.19■■■□□ 2.1
ITM2C-203ENST00000335005 FOXO4P98177 505 aa28.19■■■□□ 2.1
ITM2C-203ENST00000335005 FSD1Q9BTV5 496 aa28.19■■■□□ 2.1
ITM2C-203ENST00000335005 TFCP2Q12800 502 aa28.18■■■□□ 2.1
ITM2C-203ENST00000335005 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.18■■■□□ 2.1
ITM2C-203ENST00000335005 A0A0D9SFI3 127 aa28.17■■■□□ 2.1
ITM2C-203ENST00000335005 MBD3O95983 291 aa28.17■■■□□ 2.1
ITM2C-203ENST00000335005 ZKSCAN1P17029 563 aaPredicted RBP28.17■■■□□ 2.1
ITM2C-203ENST00000335005 ZSCAN23Q3MJ62 389 aa28.17■■■□□ 2.1
ITM2C-203ENST00000335005 CREB3L3Q68CJ9 461 aa28.17■■■□□ 2.1
ITM2C-203ENST00000335005 CAVIN1Q6NZI2 390 aaKnown RBP28.17■■■□□ 2.1
ITM2C-203ENST00000335005 ZSCAN31Q96LW9 406 aaPredicted RBP28.17■■■□□ 2.1
ITM2C-203ENST00000335005 JAKMIP1Q96N16 626 aaKnown RBP28.17■■■□□ 2.1
ITM2C-203ENST00000335005 CWC25Q9NXE8 425 aaPredicted RBP28.17■■■□□ 2.1
ITM2C-203ENST00000335005 CYP46A1Q9Y6A2 500 aa28.17■■■□□ 2.1
ITM2C-203ENST00000335005 TTLL7Q6ZT98 887 aa28.17■■■□□ 2.1
ITM2C-203ENST00000335005 JARID2Q92833 1246 aaPredicted RBP28.17■■■□□ 2.1
ITM2C-203ENST00000335005 SH2B1Q9NRF2 756 aaPredicted RBP28.17■■■□□ 2.1
ITM2C-203ENST00000335005 ADCK5Q3MIX3 580 aa28.16■■■□□ 2.1
ITM2C-203ENST00000335005 CCDC191Q8NCU4 936 aa28.16■■■□□ 2.1
ITM2C-203ENST00000335005 TCHHQ07283 1943 aa28.15■■■□□ 2.1
ITM2C-203ENST00000335005 PDRG1Q9NUG6 133 aa28.15■■■□□ 2.1
ITM2C-203ENST00000335005 LMBR1LQ6UX01 489 aa28.15■■■□□ 2.1
ITM2C-203ENST00000335005 GPR108Q9NPR9 543 aa28.15■■■□□ 2.1
ITM2C-203ENST00000335005 TICAM2Q86XR7 235 aa28.14■■■□□ 2.1
ITM2C-203ENST00000335005 A1BGP04217 495 aa28.13■■■□□ 2.09
ITM2C-203ENST00000335005 TSGA10IPQ3SY00 556 aa28.13■■■□□ 2.09
ITM2C-203ENST00000335005 ITGB4P16144 1822 aa28.13■■■□□ 2.09
ITM2C-203ENST00000335005 SLC27A2O14975 620 aa28.12■■■□□ 2.09
ITM2C-203ENST00000335005 ALDH8A1Q9H2A2 487 aaPredicted RBP28.12■■■□□ 2.09
ITM2C-203ENST00000335005 HMG20BQ9P0W2 317 aa28.12■■■□□ 2.09
ITM2C-203ENST00000335005 SPEF2Q9C093 1822 aa28.12■■■□□ 2.09
ITM2C-203ENST00000335005 PSMA5P28066 241 aa28.12■■■□□ 2.09
ITM2C-203ENST00000335005 RNF20Q5VTR2 975 aa28.12■■■□□ 2.09
ITM2C-203ENST00000335005 FOXD4L5Q5VV16 416 aaPredicted RBP28.12■■■□□ 2.09
ITM2C-203ENST00000335005 FOXD4L4Q8WXT5 416 aaPredicted RBP28.12■■■□□ 2.09
ITM2C-203ENST00000335005 CHAMP1Q96JM3 812 aa28.12■■■□□ 2.09
ITM2C-203ENST00000335005 HAUS7Q99871 368 aa28.12■■■□□ 2.09
ITM2C-203ENST00000335005 CPA1P15085 419 aa28.11■■■□□ 2.09
ITM2C-203ENST00000335005 USPL1Q5W0Q7 1092 aa28.11■■■□□ 2.09
ITM2C-203ENST00000335005 TMEM87AQ8NBN3 555 aa28.11■■■□□ 2.09
ITM2C-203ENST00000335005 PLCH1Q4KWH8 1693 aa28.11■■■□□ 2.09
ITM2C-203ENST00000335005 NCLP19338 710 aaKnown RBP28.1■■■□□ 2.09
ITM2C-203ENST00000335005 ATG9AQ7Z3C6 839 aa28.1■■■□□ 2.09
ITM2C-203ENST00000335005 DDX54Q8TDD1 881 aaKnown RBP28.1■■■□□ 2.09
ITM2C-203ENST00000335005 ATG3Q9NT62 314 aa28.1■■■□□ 2.09
ITM2C-203ENST00000335005 LARGE1O95461 756 aa28.1■■■□□ 2.09
ITM2C-203ENST00000335005 DBNDD2Q9BQY9 259 aa28.1■■■□□ 2.09
ITM2C-203ENST00000335005 LRP6O75581 1613 aa28.1■■■□□ 2.09
ITM2C-203ENST00000335005 COL14A1Q05707 1796 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms