RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 PANK2Q9BZ23 570 aa25.86■■□□□ 1.73
LIMS2-201ENST00000324938 TLR7Q9NYK1 1049 aaKnown RBP25.86■■□□□ 1.73
LIMS2-201ENST00000324938 NKX1-1Q15270 411 aaPredicted RBP25.85■■□□□ 1.73
LIMS2-201ENST00000324938 UBE3BQ7Z3V4 1068 aa25.85■■□□□ 1.73
LIMS2-201ENST00000324938 GAS2L3Q86XJ1 694 aa25.85■■□□□ 1.73
LIMS2-201ENST00000324938 KCNB2Q92953 911 aa25.84■■□□□ 1.73
LIMS2-201ENST00000324938 CARD10Q9BWT7 1032 aa25.84■■□□□ 1.73
LIMS2-201ENST00000324938 TOGARAM1Q9Y4F4 1720 aa25.84■■□□□ 1.73
LIMS2-201ENST00000324938 PTH1RQ03431 593 aa25.84■■□□□ 1.73
LIMS2-201ENST00000324938 NBPF26B4DH59 902 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 IL2RBP14784 551 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 CASP7P55210 303 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 NBPF14Q5TI25 921 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 NBPF10Q6P3W6 841 aaKnown RBP25.83■■□□□ 1.73
LIMS2-201ENST00000324938 NBPF15Q8N660 670 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 SNRKQ9NRH2 765 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 TNS2Q63HR2 1409 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 CCDC171Q6TFL3 1326 aa25.83■■□□□ 1.72
LIMS2-201ENST00000324938 PTPN12Q05209 780 aaKnown RBP25.82■■□□□ 1.72
LIMS2-201ENST00000324938 A0A087WZG4 1122 aa25.82■■□□□ 1.72
LIMS2-201ENST00000324938 ATP5J2-PTCD1G3V325 749 aa25.82■■□□□ 1.72
LIMS2-201ENST00000324938 PTCD1O75127 700 aaKnown RBP25.82■■□□□ 1.72
LIMS2-201ENST00000324938 ZNF335Q9H4Z2 1342 aaPredicted RBP25.81■■□□□ 1.72
LIMS2-201ENST00000324938 FAM43AQ8N2R8 423 aa25.81■■□□□ 1.72
LIMS2-201ENST00000324938 AK2P54819 239 aa25.81■■□□□ 1.72
LIMS2-201ENST00000324938 JARID2Q92833 1246 aaPredicted RBP25.81■■□□□ 1.72
LIMS2-201ENST00000324938 TM6SF1Q9BZW5 370 aa25.8■■□□□ 1.72
LIMS2-201ENST00000324938 NMIQ13287 307 aaPredicted RBP25.79■■□□□ 1.72
LIMS2-201ENST00000324938 BOLA2Q9H3K6 86 aa25.79■■□□□ 1.72
LIMS2-201ENST00000324938 PRPF40AO75400 957 aaKnown RBP25.79■■□□□ 1.72
LIMS2-201ENST00000324938 NECTIN1Q15223 517 aa25.79■■□□□ 1.72
LIMS2-201ENST00000324938 LIMCH1Q9UPQ0 1083 aa25.79■■□□□ 1.72
LIMS2-201ENST00000324938 CASTP20810 708 aaKnown RBP25.78■■□□□ 1.72
LIMS2-201ENST00000324938 TNNI3KQ59H18 835 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 PRPF40BQ6NWY9 871 aaKnown RBP25.78■■□□□ 1.72
LIMS2-201ENST00000324938 FAM227BQ96M60 508 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 FPGT-TNNI3KV9GXZ4 949 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 MED23Q9ULK4 1368 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 RUFY3Q7L099 469 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 FSD1Q9BTV5 496 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 ZNF445P59923 1031 aa25.77■■□□□ 1.72
LIMS2-201ENST00000324938 H7C1W4 665 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 FOXD4L5Q5VV16 416 aaPredicted RBP25.76■■□□□ 1.71
LIMS2-201ENST00000324938 FOXD4L4Q8WXT5 416 aaPredicted RBP25.76■■□□□ 1.71
LIMS2-201ENST00000324938 MAP4K1Q92918 833 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 DBNLQ9UJU6 430 aaKnown RBP25.76■■□□□ 1.71
LIMS2-201ENST00000324938 JCADQ9P266 1359 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 ATP5JP18859 108 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 TFCP2Q12800 502 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 VPS53Q5VIR6 699 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 CAVIN1Q6NZI2 390 aaKnown RBP25.76■■□□□ 1.71
LIMS2-201ENST00000324938 TTLL7Q6ZT98 887 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 ZSWIM6Q9HCJ5 1215 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 RBM8AQ9Y5S9 174 aaKnown RBP25.76■■□□□ 1.71
LIMS2-201ENST00000324938 RPAP1Q9BWH6 1393 aaPredicted RBP25.75■■□□□ 1.71
LIMS2-201ENST00000324938 A0A0D9SFI3 127 aa25.75■■□□□ 1.71
LIMS2-201ENST00000324938 GPT2Q8TD30 523 aa25.75■■□□□ 1.71
LIMS2-201ENST00000324938 JAKMIP1Q96N16 626 aaKnown RBP25.75■■□□□ 1.71
LIMS2-201ENST00000324938 WDR33Q9C0J8 1336 aaKnown RBP25.75■■□□□ 1.71
LIMS2-201ENST00000324938 RFX7Q2KHR2 1363 aa25.75■■□□□ 1.71
LIMS2-201ENST00000324938 ADCK5Q3MIX3 580 aa25.75■■□□□ 1.71
LIMS2-201ENST00000324938 CHAMP1Q96JM3 812 aa25.75■■□□□ 1.71
LIMS2-201ENST00000324938 TCHHQ07283 1943 aa25.74■■□□□ 1.71
LIMS2-201ENST00000324938 ZKSCAN1P17029 563 aaPredicted RBP25.74■■□□□ 1.71
LIMS2-201ENST00000324938 NCLP19338 710 aaKnown RBP25.74■■□□□ 1.71
LIMS2-201ENST00000324938 FOXO4P98177 505 aa25.74■■□□□ 1.71
LIMS2-201ENST00000324938 CWC25Q9NXE8 425 aaPredicted RBP25.74■■□□□ 1.71
LIMS2-201ENST00000324938 A1BGP04217 495 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 ZSCAN23Q3MJ62 389 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 CREB3L3Q68CJ9 461 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 LMBR1LQ6UX01 489 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 DDX54Q8TDD1 881 aaKnown RBP25.73■■□□□ 1.71
LIMS2-201ENST00000324938 STRN4Q9NRL3 753 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 CYP46A1Q9Y6A2 500 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.73■■□□□ 1.71
LIMS2-201ENST00000324938 CPA1P15085 419 aa25.72■■□□□ 1.71
LIMS2-201ENST00000324938 PDRG1Q9NUG6 133 aa25.72■■□□□ 1.71
LIMS2-201ENST00000324938 ITGB4P16144 1822 aa25.71■■□□□ 1.71
LIMS2-201ENST00000324938 MBD3O95983 291 aa25.7■■□□□ 1.71
LIMS2-201ENST00000324938 KCNJ4P48050 445 aa25.7■■□□□ 1.71
LIMS2-201ENST00000324938 EVA1CP58658 441 aa25.7■■□□□ 1.71
LIMS2-201ENST00000324938 CCDC191Q8NCU4 936 aa25.7■■□□□ 1.71
LIMS2-201ENST00000324938 ZSCAN31Q96LW9 406 aaPredicted RBP25.7■■□□□ 1.7
LIMS2-201ENST00000324938 SH2B1Q9NRF2 756 aaPredicted RBP25.7■■□□□ 1.7
LIMS2-201ENST00000324938 SLC27A2O14975 620 aa25.69■■□□□ 1.7
LIMS2-201ENST00000324938 LARGE1O95461 756 aa25.69■■□□□ 1.7
LIMS2-201ENST00000324938 DBNDD2Q9BQY9 259 aa25.69■■□□□ 1.7
LIMS2-201ENST00000324938 RNF20Q5VTR2 975 aa25.68■■□□□ 1.7
LIMS2-201ENST00000324938 EDC3Q96F86 508 aaKnown RBP25.68■■□□□ 1.7
LIMS2-201ENST00000324938 ZBTB3Q9H5J0 574 aa25.68■■□□□ 1.7
LIMS2-201ENST00000324938 ZNF589Q86UQ0 364 aaPredicted RBP25.67■■□□□ 1.7
LIMS2-201ENST00000324938 LARP6Q9BRS8 491 aaKnown RBP25.67■■□□□ 1.7
LIMS2-201ENST00000324938 KDM4FA0A1W2PPD8 638 aa25.67■■□□□ 1.7
LIMS2-201ENST00000324938 PSMA5P28066 241 aa25.67■■□□□ 1.7
LIMS2-201ENST00000324938 HAUS7Q99871 368 aa25.67■■□□□ 1.7
LIMS2-201ENST00000324938 SMC3Q9UQE7 1217 aa25.67■■□□□ 1.7
LIMS2-201ENST00000324938 ATG9AQ7Z3C6 839 aa25.66■■□□□ 1.7
LIMS2-201ENST00000324938 TMOD3Q9NYL9 352 aa25.66■■□□□ 1.7
LIMS2-201ENST00000324938 CHMP3Q9Y3E7 222 aa25.66■■□□□ 1.7
LIMS2-201ENST00000324938 GPR108Q9NPR9 543 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms