RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 DUSP27Q5VZP5 1158 aa16.44■□□□□ 0.22
CKS2-201ENST00000314355 ANKRD13DQ6ZTN6 518 aa16.44■□□□□ 0.22
CKS2-201ENST00000314355 SYNE4Q8N205 404 aa16.44■□□□□ 0.22
CKS2-201ENST00000314355 C7orf43Q8WVR3 580 aa16.44■□□□□ 0.22
CKS2-201ENST00000314355 CRAMP1Q96RY5 1269 aa16.44■□□□□ 0.22
CKS2-201ENST00000314355 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
CKS2-201ENST00000314355 PRELPP51888 382 aa16.43■□□□□ 0.22
CKS2-201ENST00000314355 IFT57Q9NWB7 429 aa16.43■□□□□ 0.22
CKS2-201ENST00000314355 CHPF2Q9P2E5 772 aa16.43■□□□□ 0.22
CKS2-201ENST00000314355 UBN2Q6ZU65 1347 aa16.43■□□□□ 0.22
CKS2-201ENST00000314355 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
CKS2-201ENST00000314355 NTSR2O95665 410 aa16.42■□□□□ 0.22
CKS2-201ENST00000314355 HOXA10P31260 410 aaPredicted RBP16.42■□□□□ 0.22
CKS2-201ENST00000314355 IARSP41252 1262 aaKnown RBP16.42■□□□□ 0.22
CKS2-201ENST00000314355 PROSER3Q2NL68 480 aa16.42■□□□□ 0.22
CKS2-201ENST00000314355 SLC10A5Q5PT55 438 aa16.42■□□□□ 0.22
CKS2-201ENST00000314355 PLBD2Q8NHP8 589 aa16.42■□□□□ 0.22
CKS2-201ENST00000314355 ZNF277Q9NRM2 450 aaPredicted RBP16.42■□□□□ 0.22
CKS2-201ENST00000314355 SLX4Q8IY92 1834 aa16.41■□□□□ 0.22
CKS2-201ENST00000314355 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
CKS2-201ENST00000314355 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
CKS2-201ENST00000314355 DDNO94850 711 aaPredicted RBP16.41■□□□□ 0.22
CKS2-201ENST00000314355 HSP90B1P14625 803 aaKnown RBP16.41■□□□□ 0.22
CKS2-201ENST00000314355 EIF6P56537 245 aaKnown RBP16.41■□□□□ 0.22
CKS2-201ENST00000314355 KRT24Q2M2I5 525 aa16.41■□□□□ 0.22
CKS2-201ENST00000314355 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
CKS2-201ENST00000314355 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
CKS2-201ENST00000314355 PSMD1Q99460 953 aa16.41■□□□□ 0.22
CKS2-201ENST00000314355 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
CKS2-201ENST00000314355 SH3TC1Q8TE82 1336 aa16.41■□□□□ 0.22
CKS2-201ENST00000314355 NUP98P52948 1817 aa16.4■□□□□ 0.22
CKS2-201ENST00000314355 BBOX1O75936 387 aa16.4■□□□□ 0.22
CKS2-201ENST00000314355 GOLGA2Q08379 1002 aa16.4■□□□□ 0.22
CKS2-201ENST00000314355 LRP10Q7Z4F1 713 aa16.4■□□□□ 0.22
CKS2-201ENST00000314355 NLRP10Q86W26 655 aa16.4■□□□□ 0.22
CKS2-201ENST00000314355 SUPT20HQ8NEM7 779 aa16.4■□□□□ 0.22
CKS2-201ENST00000314355 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
CKS2-201ENST00000314355 DDX58O95786 925 aaKnown RBP16.39■□□□□ 0.21
CKS2-201ENST00000314355 TNRC6CQ9HCJ0 1690 aaKnown RBP16.39■□□□□ 0.21
CKS2-201ENST00000314355 CCDC88AQ3V6T2 1871 aa16.39■□□□□ 0.21
CKS2-201ENST00000314355 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
CKS2-201ENST00000314355 RIC1Q4ADV7 1423 aa16.38■□□□□ 0.21
CKS2-201ENST00000314355 CCDC30Q5VVM6 783 aa16.38■□□□□ 0.21
CKS2-201ENST00000314355 LARGE2Q8N3Y3 721 aa16.38■□□□□ 0.21
CKS2-201ENST00000314355 VPS33BQ9H267 617 aa16.38■□□□□ 0.21
CKS2-201ENST00000314355 MRS2Q9HD23 443 aa16.38■□□□□ 0.21
CKS2-201ENST00000314355 COL11A2P13942 1736 aaPredicted RBP16.38■□□□□ 0.21
CKS2-201ENST00000314355 FER1L6Q2WGJ9 1857 aa16.37■□□□□ 0.21
CKS2-201ENST00000314355 ZNF853P0CG23 659 aa16.37■□□□□ 0.21
CKS2-201ENST00000314355 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
CKS2-201ENST00000314355 CLEC11AQ9Y240 323 aa16.37■□□□□ 0.21
CKS2-201ENST00000314355 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
CKS2-201ENST00000314355 LMOD1P29536 600 aaPredicted RBP16.36■□□□□ 0.21
CKS2-201ENST00000314355 CHADLQ6NUI6 762 aa16.36■□□□□ 0.21
CKS2-201ENST00000314355 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
CKS2-201ENST00000314355 PNMA8AQ86V59 439 aaPredicted RBP16.36■□□□□ 0.21
CKS2-201ENST00000314355 NIM1KQ8IY84 436 aa16.36■□□□□ 0.21
CKS2-201ENST00000314355 HACL1Q9UJ83 578 aa16.36■□□□□ 0.21
CKS2-201ENST00000314355 ATP6V0A2Q9Y487 856 aa16.36■□□□□ 0.21
CKS2-201ENST00000314355 CACNA1SQ13698 1873 aa16.35■□□□□ 0.21
CKS2-201ENST00000314355 EAPPQ56P03 285 aaPredicted RBP16.35■□□□□ 0.21
CKS2-201ENST00000314355 SP8Q8IXZ3 490 aa16.35■□□□□ 0.21
CKS2-201ENST00000314355 GPC2Q8N158 579 aa16.35■□□□□ 0.21
CKS2-201ENST00000314355 MPNDQ8N594 471 aa16.35■□□□□ 0.21
CKS2-201ENST00000314355 STK31Q9BXU1 1019 aa16.35■□□□□ 0.21
CKS2-201ENST00000314355 POTECB2RU33 542 aa16.34■□□□□ 0.21
CKS2-201ENST00000314355 ATP5J2-PTCD1G3V325 749 aa16.34■□□□□ 0.21
CKS2-201ENST00000314355 FZD9O00144 591 aa16.34■□□□□ 0.21
CKS2-201ENST00000314355 PPIP5K2O43314 1243 aa16.34■□□□□ 0.21
CKS2-201ENST00000314355 CCDC27Q2M243 656 aa16.34■□□□□ 0.21
CKS2-201ENST00000314355 DPP8Q6V1X1 898 aaPredicted RBP16.34■□□□□ 0.21
CKS2-201ENST00000314355 KLRG1Q96E93 195 aa16.34■□□□□ 0.21
CKS2-201ENST00000314355 L3MBTL3Q96JM7 780 aaPredicted RBP16.34■□□□□ 0.21
CKS2-201ENST00000314355 GJA3Q9Y6H8 435 aa16.34■□□□□ 0.21
CKS2-201ENST00000314355 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.21
CKS2-201ENST00000314355 DICER1Q9UPY3 1922 aaKnown RBP16.33■□□□□ 0.21
CKS2-201ENST00000314355 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.2
CKS2-201ENST00000314355 GRAPQ13588 217 aa16.33■□□□□ 0.2
CKS2-201ENST00000314355 LDHDQ86WU2 507 aa16.33■□□□□ 0.2
CKS2-201ENST00000314355 DNAJC5GQ8N7S2 189 aa16.33■□□□□ 0.2
CKS2-201ENST00000314355 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
CKS2-201ENST00000314355 FAM89AQ96GI7 184 aa16.33■□□□□ 0.2
CKS2-201ENST00000314355 ISCA1Q9BUE6 129 aa16.33■□□□□ 0.2
CKS2-201ENST00000314355 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.2
CKS2-201ENST00000314355 ABCC4O15439 1325 aa16.32■□□□□ 0.2
CKS2-201ENST00000314355 EPHX2P34913 555 aa16.32■□□□□ 0.2
CKS2-201ENST00000314355 NEXNQ0ZGT2 675 aa16.32■□□□□ 0.2
CKS2-201ENST00000314355 C3orf67Q6ZVT6 689 aa16.32■□□□□ 0.2
CKS2-201ENST00000314355 TAF1DQ9H5J8 278 aaPredicted RBP16.32■□□□□ 0.2
CKS2-201ENST00000314355 WDR90Q96KV7 1748 aa16.31■□□□□ 0.2
CKS2-201ENST00000314355 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
CKS2-201ENST00000314355 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
CKS2-201ENST00000314355 WWC1Q8IX03 1113 aa16.31■□□□□ 0.2
CKS2-201ENST00000314355 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
CKS2-201ENST00000314355 MYD88Q99836 296 aa16.31■□□□□ 0.2
CKS2-201ENST00000314355 PHAXQ9H814 394 aaKnown RBP16.31■□□□□ 0.2
CKS2-201ENST00000314355 ZNF541Q9H0D2 1346 aa16.3■□□□□ 0.2
CKS2-201ENST00000314355 IRS4O14654 1257 aaPredicted RBP16.3■□□□□ 0.2
CKS2-201ENST00000314355 HTRA3P83110 453 aa16.3■□□□□ 0.2
CKS2-201ENST00000314355 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms