RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 USP31Q70CQ4 1352 aa17.07■□□□□ 0.32
KDM1B-201ENST00000297792 RIOK3O14730 519 aaKnown RBP17.07■□□□□ 0.32
KDM1B-201ENST00000297792 TTC14Q96N46 770 aa17.07■□□□□ 0.32
KDM1B-201ENST00000297792 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
KDM1B-201ENST00000297792 PROSER3Q2NL68 480 aa17.07■□□□□ 0.32
KDM1B-201ENST00000297792 MTERF4Q7Z6M4 381 aaKnown RBP17.07■□□□□ 0.32
KDM1B-201ENST00000297792 NRBP1Q9UHY1 535 aa17.07■□□□□ 0.32
KDM1B-201ENST00000297792 PSME1Q06323 249 aa17.06■□□□□ 0.32
KDM1B-201ENST00000297792 CREB3L3Q68CJ9 461 aa17.06■□□□□ 0.32
KDM1B-201ENST00000297792 PDCL2Q8N4E4 241 aa17.06■□□□□ 0.32
KDM1B-201ENST00000297792 BCL2L12Q9HB09 334 aa17.06■□□□□ 0.32
KDM1B-201ENST00000297792 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
KDM1B-201ENST00000297792 TAF6LQ9Y6J9 622 aa17.06■□□□□ 0.32
KDM1B-201ENST00000297792 TCHHQ07283 1943 aa17.06■□□□□ 0.32
KDM1B-201ENST00000297792 PLEKHG1Q9ULL1 1385 aa17.06■□□□□ 0.32
KDM1B-201ENST00000297792 TTC21AQ8NDW8 1320 aa17.05■□□□□ 0.32
KDM1B-201ENST00000297792 TYRO3Q06418 890 aa17.05■□□□□ 0.32
KDM1B-201ENST00000297792 LARP1Q6PKG0 1096 aaKnown RBP17.05■□□□□ 0.32
KDM1B-201ENST00000297792 DNAJC25Q9H1X3 360 aa17.05■□□□□ 0.32
KDM1B-201ENST00000297792 RGPD8O14715 1765 aaPredicted RBP17.05■□□□□ 0.32
KDM1B-201ENST00000297792 U2AF2P26368 475 aaKnown RBP eCLIP17.05■□□□□ 0.32
KDM1B-201ENST00000297792 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
KDM1B-201ENST00000297792 CCDC94Q9BW85 323 aaPredicted RBP17.05■□□□□ 0.32
KDM1B-201ENST00000297792 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
KDM1B-201ENST00000297792 ERCC4Q92889 916 aaPredicted RBP17.04■□□□□ 0.32
KDM1B-201ENST00000297792 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
KDM1B-201ENST00000297792 JAK2O60674 1132 aa17.04■□□□□ 0.32
KDM1B-201ENST00000297792 CHGBP05060 677 aa17.04■□□□□ 0.32
KDM1B-201ENST00000297792 C1orf141Q5JVX7 400 aa17.04■□□□□ 0.32
KDM1B-201ENST00000297792 BEND3Q5T5X7 828 aa17.04■□□□□ 0.32
KDM1B-201ENST00000297792 RIC3Q7Z5B4 369 aa17.04■□□□□ 0.32
KDM1B-201ENST00000297792 PRIMPOLQ96LW4 560 aa17.04■□□□□ 0.32
KDM1B-201ENST00000297792 FILIP1Q7Z7B0 1213 aa17.04■□□□□ 0.32
KDM1B-201ENST00000297792 KCNF1Q9H3M0 494 aa17.04■□□□□ 0.32
KDM1B-201ENST00000297792 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.04■□□□□ 0.32
KDM1B-201ENST00000297792 V9GYY5 206 aaPredicted RBP17.04■□□□□ 0.32
KDM1B-201ENST00000297792 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
KDM1B-201ENST00000297792 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
KDM1B-201ENST00000297792 TPD52L1Q16890 204 aaPredicted RBP17.03■□□□□ 0.32
KDM1B-201ENST00000297792 PHF8Q9UPP1 1060 aa17.03■□□□□ 0.32
KDM1B-201ENST00000297792 AKAP12Q02952 1782 aa17.03■□□□□ 0.32
KDM1B-201ENST00000297792 ZNF710Q8N1W2 664 aa17.03■□□□□ 0.32
KDM1B-201ENST00000297792 VPS53Q5VIR6 699 aa17.03■□□□□ 0.32
KDM1B-201ENST00000297792 CCDC129Q6ZRS4 1044 aa17.03■□□□□ 0.32
KDM1B-201ENST00000297792 THEMISQ8N1K5 641 aaPredicted RBP17.03■□□□□ 0.32
KDM1B-201ENST00000297792 ZSCAN31Q96LW9 406 aaPredicted RBP17.03■□□□□ 0.32
KDM1B-201ENST00000297792 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
KDM1B-201ENST00000297792 GOLGA6L19H0YKK7 550 aa17.02■□□□□ 0.32
KDM1B-201ENST00000297792 FAM200AQ8TCP9 573 aa17.02■□□□□ 0.32
KDM1B-201ENST00000297792 ORAI2Q96SN7 254 aa17.02■□□□□ 0.32
KDM1B-201ENST00000297792 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.32
KDM1B-201ENST00000297792 RNF20Q5VTR2 975 aa17.02■□□□□ 0.32
KDM1B-201ENST00000297792 SH2B1Q9NRF2 756 aaPredicted RBP17.02■□□□□ 0.32
KDM1B-201ENST00000297792 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
KDM1B-201ENST00000297792 KDRP35968 1356 aa17.02■□□□□ 0.31
KDM1B-201ENST00000297792 EAF2Q96CJ1 260 aaPredicted RBP17.01■□□□□ 0.31
KDM1B-201ENST00000297792 EVI5LQ96CN4 794 aa17.01■□□□□ 0.31
KDM1B-201ENST00000297792 BECN2A8MW95 431 aa17.01■□□□□ 0.31
KDM1B-201ENST00000297792 PSMA5P28066 241 aa17.01■□□□□ 0.31
KDM1B-201ENST00000297792 ZNF165P49910 485 aa17.01■□□□□ 0.31
KDM1B-201ENST00000297792 SLC39A6Q13433 755 aa17.01■□□□□ 0.31
KDM1B-201ENST00000297792 POLA2Q14181 598 aa17.01■□□□□ 0.31
KDM1B-201ENST00000297792 NAA30Q147X3 362 aaPredicted RBP17.01■□□□□ 0.31
KDM1B-201ENST00000297792 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
KDM1B-201ENST00000297792 TRMT1Q9NXH9 659 aaKnown RBP17.01■□□□□ 0.31
KDM1B-201ENST00000297792 SLC27A2O14975 620 aa17.01■□□□□ 0.31
KDM1B-201ENST00000297792 ATP2B3Q16720 1220 aa17.01■□□□□ 0.31
KDM1B-201ENST00000297792 CBX8Q9HC52 389 aa17■□□□□ 0.31
KDM1B-201ENST00000297792 ZC3H6P61129 1189 aaKnown RBP17■□□□□ 0.31
KDM1B-201ENST00000297792 FMNL2Q96PY5 1086 aa17■□□□□ 0.31
KDM1B-201ENST00000297792 AOX1Q06278 1338 aa17■□□□□ 0.31
KDM1B-201ENST00000297792 NR1I2O75469 434 aa17■□□□□ 0.31
KDM1B-201ENST00000297792 ST3GAL1Q11201 340 aa17■□□□□ 0.31
KDM1B-201ENST00000297792 SUCLG2Q96I99 432 aa17■□□□□ 0.31
KDM1B-201ENST00000297792 UBR1Q8IWV7 1749 aa17■□□□□ 0.31
KDM1B-201ENST00000297792 TNNT1P13805 278 aa16.99■□□□□ 0.31
KDM1B-201ENST00000297792 CCT2P78371 535 aaKnown RBP16.99■□□□□ 0.31
KDM1B-201ENST00000297792 ZNF589Q86UQ0 364 aaPredicted RBP16.99■□□□□ 0.31
KDM1B-201ENST00000297792 KIAA1524Q8TCG1 905 aa16.99■□□□□ 0.31
KDM1B-201ENST00000297792 FTOQ9C0B1 505 aaKnown RBP eCLIP16.99■□□□□ 0.319e-6■□□□□ 10.5
KDM1B-201ENST00000297792 CLIP2Q9UDT6 1046 aa16.99■□□□□ 0.31
KDM1B-201ENST00000297792 PDCP20941 246 aa16.99■□□□□ 0.31
KDM1B-201ENST00000297792 TMEM87AQ8NBN3 555 aa16.99■□□□□ 0.31
KDM1B-201ENST00000297792 ZSWIM6Q9HCJ5 1215 aa16.99■□□□□ 0.31
KDM1B-201ENST00000297792 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
KDM1B-201ENST00000297792 MRVI1Q9Y6F6 885 aa16.99■□□□□ 0.31
KDM1B-201ENST00000297792 DDX17Q92841 729 aaKnown RBP16.99■□□□□ 0.31
KDM1B-201ENST00000297792 BRF1Q92994 677 aa16.99■□□□□ 0.31
KDM1B-201ENST00000297792 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
KDM1B-201ENST00000297792 NEUROD6Q96NK8 337 aa16.98■□□□□ 0.31
KDM1B-201ENST00000297792 SEC62Q99442 399 aaKnown RBP16.98■□□□□ 0.31
KDM1B-201ENST00000297792 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
KDM1B-201ENST00000297792 SYTL4Q96C24 671 aaPredicted RBP16.98■□□□□ 0.31
KDM1B-201ENST00000297792 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
KDM1B-201ENST00000297792 RAB11FIP4Q86YS3 637 aa16.98■□□□□ 0.31
KDM1B-201ENST00000297792 TTC41PQ6P2S7 1318 aa16.97■□□□□ 0.31
KDM1B-201ENST00000297792 HTATSF1O43719 755 aaKnown RBP16.97■□□□□ 0.31
KDM1B-201ENST00000297792 ARID5BQ14865 1188 aa16.97■□□□□ 0.31
KDM1B-201ENST00000297792 SLFNL1Q499Z3 407 aa16.97■□□□□ 0.31
KDM1B-201ENST00000297792 ZRSR1Q15695 479 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms