RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 SPATA31E1Q6ZUB1 1445 aa12.4□□□□□ -0.43
PKNOX1-201ENST00000291547 TSG101Q99816 390 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 CCDC184Q52MB2 194 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 KRT222Q8N1A0 295 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 FBF1Q8TES7 1133 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 RNF123Q5XPI4 1314 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 PLA2R1Q13018 1463 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 TMEM2Q9UHN6 1383 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 ATP2C2O75185 946 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 SPATA24Q86W54 205 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 TAOK3Q9H2K8 898 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 GNG11P61952 73 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 ZNF530Q6P9A1 599 aaPredicted RBP12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 AIDAQ96BJ3 306 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 LRP2BPQ9P2M1 347 aa12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 INO80Q9ULG1 1556 aaPredicted RBP12.39□□□□□ -0.43
PKNOX1-201ENST00000291547 TMCO5BA8MYB1 307 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 BIN1O00499 593 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 GLRX3O76003 335 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 MX1P20591 662 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 ZNF165P49910 485 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 FSIP1Q8NA03 581 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 CNNM3Q8NE01 707 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 DIP2BQ9P265 1576 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 ERVK-7P63135 1459 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 GOLGA6L9A6NEM1 432 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 SKAP1Q86WV1 359 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 ALS2CR12Q96Q35 445 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 UBA5Q9GZZ9 404 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 DMRT2Q9Y5R5 561 aa12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 TATP17735 454 aaPredicted RBP12.38□□□□□ -0.43
PKNOX1-201ENST00000291547 VGLL3A8MV65 326 aa12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 LRPPRCP42704 1394 aaKnown RBP12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 ARHGAP31Q2M1Z3 1444 aa12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 FSD2A1L4K1 749 aa12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 LIG1P18858 919 aa12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 C6orf163Q5TEZ5 329 aa12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 CEP112Q8N8E3 955 aa12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 CCDC12Q8WUD4 166 aaPredicted RBP12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 TFIP11Q9UBB9 837 aaKnown RBP12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 FGFR1OPO95684 399 aaKnown RBP12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 HSPA4P34932 840 aa12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 TEX2Q8IWB9 1127 aa12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 ZSCAN29Q8IWY8 852 aaPredicted RBP12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 KIF1BPQ96EK5 621 aa12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 PAXBP1Q9Y5B6 917 aa12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 MPHOSPH10O00566 681 aaKnown RBP12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
PKNOX1-201ENST00000291547 SMARCA5O60264 1052 aaPredicted RBP12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 PRPF4BQ13523 1007 aaKnown RBP12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 SPINK5Q9NQ38 1064 aaPredicted RBP12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 CABP4P57796 275 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 CCDC82Q8N4S0 544 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 RSPH14Q9UHP6 348 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 NCKAP5LQ9HCH0 1330 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 MTIF2P46199 727 aaKnown RBP12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 RBM5P52756 815 aaKnown RBP eCLIP12.36□□□□□ -0.434e-6■■□□□ 12.5
PKNOX1-201ENST00000291547 HOMER2Q9NSB8 354 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 SERPINA10Q9UK55 444 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 KIF1BO60333 1816 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 CTNNA2P26232 953 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 STX1AQ16623 288 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 NME9Q86XW9 330 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 JADE2Q9NQC1 790 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 RBM28Q9NW13 759 aaKnown RBP12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 ABCF2Q9UG63 623 aa12.36□□□□□ -0.43
PKNOX1-201ENST00000291547 CCDC196A0A1B0GTZ2 297 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 HSPA2P54652 639 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 KLHL40Q2TBA0 621 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 CCDC85AQ96PX6 553 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 RNF216Q9NWF9 866 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 DIP2CQ9Y2E4 1556 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 NSD2O96028 1365 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 SLFN5Q08AF3 891 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 MYRIPQ8NFW9 859 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 RRS1Q15050 365 aaKnown RBP12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 CCDC96Q2M329 555 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 ZNF500O60304 480 aaPredicted RBP12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 NOP2P46087 812 aaKnown RBP12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 DRC1Q96MC2 740 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 BOLA2Q9H3K6 86 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 ARFGAP3Q9NP61 516 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 PLEKHH1Q9ULM0 1364 aa12.35□□□□□ -0.43
PKNOX1-201ENST00000291547 BAG4O95429 457 aaKnown RBP12.34□□□□□ -0.43
PKNOX1-201ENST00000291547 RBM27Q9P2N5 1060 aaKnown RBP12.34□□□□□ -0.43
PKNOX1-201ENST00000291547 ANKRD36BQ8N2N9 1353 aa12.34□□□□□ -0.43
PKNOX1-201ENST00000291547 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
PKNOX1-201ENST00000291547 MYOM2P54296 1465 aa12.34□□□□□ -0.43
PKNOX1-201ENST00000291547 HCLS1P14317 486 aaPredicted RBP12.34□□□□□ -0.43
PKNOX1-201ENST00000291547 CCDC6Q16204 474 aa12.34□□□□□ -0.43
PKNOX1-201ENST00000291547 UVSSAQ2YD98 709 aa12.34□□□□□ -0.43
PKNOX1-201ENST00000291547 IVLP07476 585 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms