RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 PLEKHF1Q96S99 279 aa19.33■□□□□ 0.69
SCAP-201ENST00000265565 ZSWIM4Q9H7M6 989 aa19.33■□□□□ 0.69
SCAP-201ENST00000265565 CAVIN2O95810 425 aa19.33■□□□□ 0.69
SCAP-201ENST00000265565 AOPEPQ8N6M6 819 aa19.33■□□□□ 0.69
SCAP-201ENST00000265565 CEP89Q96ST8 783 aa19.33■□□□□ 0.69
SCAP-201ENST00000265565 NPATQ14207 1427 aa19.33■□□□□ 0.68
SCAP-201ENST00000265565 ZSCAN12O43309 604 aa19.33■□□□□ 0.68
SCAP-201ENST00000265565 ERLIN1O75477 346 aa19.33■□□□□ 0.68
SCAP-201ENST00000265565 CCDC144CPQ8IYA2 1237 aa19.33■□□□□ 0.68
SCAP-201ENST00000265565 SNX14Q9Y5W7 946 aa19.33■□□□□ 0.68
SCAP-201ENST00000265565 G3V3G9 751 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 ABCC4O15439 1325 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 GTF2F1P35269 517 aaKnown RBP eCLIP19.32■□□□□ 0.688e-7■■■□□ 18.7
SCAP-201ENST00000265565 PIP4K2AP48426 406 aaPredicted RBP19.32■□□□□ 0.68
SCAP-201ENST00000265565 METTL24Q5JXM2 366 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 DCAF8Q5TAQ9 597 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 RIMS2Q9UQ26 1411 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 ZNF213O14771 459 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 EPB41L2O43491 1005 aaKnown RBP19.32■□□□□ 0.68
SCAP-201ENST00000265565 TXLNAP40222 546 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 CNNM3Q8NE01 707 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 AIDAQ96BJ3 306 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 MAGEC2Q9UBF1 373 aaPredicted RBP19.32■□□□□ 0.68
SCAP-201ENST00000265565 SLC39A6Q13433 755 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 ZSCAN25Q6NSZ9 544 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 CHST3Q7LGC8 479 aa19.32■□□□□ 0.68
SCAP-201ENST00000265565 GRM8O00222 908 aa19.31■□□□□ 0.68
SCAP-201ENST00000265565 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
SCAP-201ENST00000265565 ZBTB3Q9H5J0 574 aa19.31■□□□□ 0.68
SCAP-201ENST00000265565 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
SCAP-201ENST00000265565 MAP3K19Q56UN5 1328 aa19.31■□□□□ 0.68
SCAP-201ENST00000265565 FAM193AP78312 1265 aa19.31■□□□□ 0.68
SCAP-201ENST00000265565 UBAC1Q9BSL1 405 aa19.31■□□□□ 0.68
SCAP-201ENST00000265565 H0YHG0 523 aa19.31■□□□□ 0.68
SCAP-201ENST00000265565 KIF4BQ2VIQ3 1234 aa19.31■□□□□ 0.68
SCAP-201ENST00000265565 ZFYVE9O95405 1425 aa19.31■□□□□ 0.68
SCAP-201ENST00000265565 ZMYM3Q14202 1370 aa19.31■□□□□ 0.68
SCAP-201ENST00000265565 MAST1Q9Y2H9 1570 aa19.31■□□□□ 0.68
SCAP-201ENST00000265565 PATL2C9JE40 543 aaKnown RBP19.3■□□□□ 0.68
SCAP-201ENST00000265565 MPHOSPH8Q99549 860 aa19.3■□□□□ 0.68
SCAP-201ENST00000265565 SGSM2O43147 1006 aa19.3■□□□□ 0.68
SCAP-201ENST00000265565 RUFY3Q7L099 469 aa19.3■□□□□ 0.68
SCAP-201ENST00000265565 ZNHIT6Q9NWK9 470 aaKnown RBP19.3■□□□□ 0.68
SCAP-201ENST00000265565 DNAI1Q9UI46 699 aa19.3■□□□□ 0.68
SCAP-201ENST00000265565 EIF3JO75822 258 aaKnown RBP19.3■□□□□ 0.68
SCAP-201ENST00000265565 COPS6Q7L5N1 327 aa19.3■□□□□ 0.68
SCAP-201ENST00000265565 ABCC2Q92887 1545 aa19.29■□□□□ 0.68
SCAP-201ENST00000265565 LMOD1P29536 600 aaPredicted RBP19.29■□□□□ 0.68
SCAP-201ENST00000265565 RIOK3O14730 519 aaKnown RBP19.29■□□□□ 0.68
SCAP-201ENST00000265565 MICU3Q86XE3 530 aa19.29■□□□□ 0.68
SCAP-201ENST00000265565 PLA2R1Q13018 1463 aa19.29■□□□□ 0.68
SCAP-201ENST00000265565 KSR2Q6VAB6 950 aa19.29■□□□□ 0.68
SCAP-201ENST00000265565 SIRT2Q8IXJ6 389 aa19.29■□□□□ 0.68
SCAP-201ENST00000265565 KRT222Q8N1A0 295 aa19.29■□□□□ 0.68
SCAP-201ENST00000265565 ERVK-7P63135 1459 aa19.29■□□□□ 0.68
SCAP-201ENST00000265565 YTHDC2Q9H6S0 1430 aaKnown RBP19.29■□□□□ 0.68
SCAP-201ENST00000265565 ABCC1P33527 1531 aa19.29■□□□□ 0.68
SCAP-201ENST00000265565 KIF21AQ7Z4S6 1674 aa19.28■□□□□ 0.68
SCAP-201ENST00000265565 XAGE3Q8WTP9 111 aa19.28■□□□□ 0.68
SCAP-201ENST00000265565 ZBTB9Q96C00 473 aa19.28■□□□□ 0.68
SCAP-201ENST00000265565 CASQ1P31415 396 aa19.28■□□□□ 0.68
SCAP-201ENST00000265565 ANKRD13DQ6ZTN6 518 aa19.28■□□□□ 0.68
SCAP-201ENST00000265565 ABCF2Q9UG63 623 aa19.28■□□□□ 0.68
SCAP-201ENST00000265565 TTC41PQ6P2S7 1318 aa19.28■□□□□ 0.68
SCAP-201ENST00000265565 CCDC171Q6TFL3 1326 aa19.28■□□□□ 0.68
SCAP-201ENST00000265565 GNG11P61952 73 aa19.28■□□□□ 0.68
SCAP-201ENST00000265565 NBPF7P0C2Y1 421 aaPredicted RBP19.28■□□□□ 0.68
SCAP-201ENST00000265565 MYRIPQ8NFW9 859 aa19.28■□□□□ 0.68
SCAP-201ENST00000265565 MARCKSP29966 332 aaPredicted RBP19.27■□□□□ 0.68
SCAP-201ENST00000265565 ASXL2Q76L83 1435 aa19.27■□□□□ 0.68
SCAP-201ENST00000265565 KLF18A0A0U1RQI7 1052 aa19.27■□□□□ 0.68
SCAP-201ENST00000265565 BMS1Q14692 1282 aaKnown RBP19.27■□□□□ 0.68
SCAP-201ENST00000265565 MRPS27Q92552 414 aaKnown RBP19.27■□□□□ 0.67
SCAP-201ENST00000265565 PRDM11Q9NQV5 511 aa19.27■□□□□ 0.67
SCAP-201ENST00000265565 LRP2BPQ9P2M1 347 aa19.27■□□□□ 0.67
SCAP-201ENST00000265565 TRIM34Q9BYJ4 488 aa19.26■□□□□ 0.67
SCAP-201ENST00000265565 MINDY4BA8MYZ0 360 aa19.26■□□□□ 0.67
SCAP-201ENST00000265565 LRRC59Q96AG4 307 aaKnown RBP19.26■□□□□ 0.67
SCAP-201ENST00000265565 FAM227BQ96M60 508 aa19.26■□□□□ 0.67
SCAP-201ENST00000265565 ZNF500O60304 480 aaPredicted RBP19.26■□□□□ 0.67
SCAP-201ENST00000265565 ALDH1L1O75891 902 aa19.26■□□□□ 0.67
SCAP-201ENST00000265565 U2AF2P26368 475 aaKnown RBP eCLIP19.26■□□□□ 0.675e-6■□□□□ 11
SCAP-201ENST00000265565 UBASH3AP57075 661 aa19.26■□□□□ 0.67
SCAP-201ENST00000265565 APOBRQ0VD83 1088 aa19.26■□□□□ 0.67
SCAP-201ENST00000265565 NAPBQ9H115 298 aa19.26■□□□□ 0.67
SCAP-201ENST00000265565 ERBB4Q15303 1308 aa19.26■□□□□ 0.67
SCAP-201ENST00000265565 ANKLE2Q86XL3 938 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 AKAP2Q9Y2D5 859 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 RTL1A6NKG5 1358 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 MCMDC2Q4G0Z9 681 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 TAF3Q5VWG9 929 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 LMBR1LQ6UX01 489 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 LINS1Q8NG48 757 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 TERF1P54274 439 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 KLHDC4Q8TBB5 520 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 RAD50Q92878 1312 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 HSPA4P34932 840 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 DEF6Q9H4E7 631 aa19.25■□□□□ 0.67
SCAP-201ENST00000265565 IFIT3O14879 490 aaKnown RBP19.24■□□□□ 0.67
SCAP-201ENST00000265565 SYKP43405 635 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms