RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 CHGBP05060 677 aa16.59■□□□□ 0.25
TUBGCP3-201ENST00000261965 HSP90AA4PQ58FG1 418 aa16.59■□□□□ 0.25
TUBGCP3-201ENST00000261965 PDLIM2Q96JY6 352 aa16.59■□□□□ 0.25
TUBGCP3-201ENST00000261965 BIN1O00499 593 aa16.59■□□□□ 0.25
TUBGCP3-201ENST00000261965 EIF4A1P60842 406 aaKnown RBP16.59■□□□□ 0.25
TUBGCP3-201ENST00000261965 NMIQ13287 307 aaPredicted RBP16.59■□□□□ 0.25
TUBGCP3-201ENST00000261965 STAP2Q9UGK3 403 aa16.59■□□□□ 0.25
TUBGCP3-201ENST00000261965 CLTCQ00610 1675 aaKnown RBP16.59■□□□□ 0.25
TUBGCP3-201ENST00000261965 CCDC85AQ96PX6 553 aaPredicted RBP16.59■□□□□ 0.25
TUBGCP3-201ENST00000261965 ARHGEF10O15013 1369 aa16.58■□□□□ 0.25
TUBGCP3-201ENST00000261965 SALL3Q9BXA9 1300 aa16.58■□□□□ 0.24
TUBGCP3-201ENST00000261965 ME1P48163 572 aa16.58■□□□□ 0.24
TUBGCP3-201ENST00000261965 MAP3K11Q16584 847 aa16.58■□□□□ 0.24
TUBGCP3-201ENST00000261965 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
TUBGCP3-201ENST00000261965 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
TUBGCP3-201ENST00000261965 ME3Q16798 604 aa16.58■□□□□ 0.24
TUBGCP3-201ENST00000261965 BEND3Q5T5X7 828 aa16.58■□□□□ 0.24
TUBGCP3-201ENST00000261965 PHF8Q9UPP1 1060 aa16.58■□□□□ 0.24
TUBGCP3-201ENST00000261965 TTC21AQ8NDW8 1320 aa16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 HSP90AB4PQ58FF6 505 aa16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 CEP170BQ9Y4F5 1589 aaPredicted RBP16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 LRMPQ12912 555 aa16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 DACT1Q9NYF0 836 aa16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 TAF6LQ9Y6J9 622 aa16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 ATP5J2-PTCD1G3V325 749 aa16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 UBE2HP62256 183 aa16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 CCDC73Q6ZRK6 1079 aa16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 RIMS1Q86UR5 1692 aaKnown RBP16.57■□□□□ 0.24
TUBGCP3-201ENST00000261965 CHMP4CQ96CF2 233 aa16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 NLRP2Q9NX02 1062 aa16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 CDC42BPGQ6DT37 1551 aa16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 DLC1Q96QB1 1528 aa16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 CCT2P78371 535 aaKnown RBP16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 CCDC129Q6ZRS4 1044 aa16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 PDILTQ8N807 584 aa16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 DNAJC25Q9H1X3 360 aa16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 BICC1Q9H694 974 aaKnown RBP16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 OVOS2A0A0J9YW53 1432 aa16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 OVOS2Q6IE36 1432 aa16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 BLOC1S2Q6QNY1 142 aa16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 CDC37L1Q7L3B6 337 aa16.56■□□□□ 0.24
TUBGCP3-201ENST00000261965 RIOK3O14730 519 aaKnown RBP16.55■□□□□ 0.24
TUBGCP3-201ENST00000261965 ANKRD26Q9UPS8 1709 aa16.55■□□□□ 0.24
TUBGCP3-201ENST00000261965 ZNF500O60304 480 aaPredicted RBP16.55■□□□□ 0.24
TUBGCP3-201ENST00000261965 EAF2Q96CJ1 260 aaPredicted RBP16.55■□□□□ 0.24
TUBGCP3-201ENST00000261965 SUCLG2Q96I99 432 aa16.55■□□□□ 0.24
TUBGCP3-201ENST00000261965 HTATSF1O43719 755 aaKnown RBP16.55■□□□□ 0.24
TUBGCP3-201ENST00000261965 ANO6Q4KMQ2 910 aa16.55■□□□□ 0.24
TUBGCP3-201ENST00000261965 PLEKHO1Q53GL0 409 aaPredicted RBP16.55■□□□□ 0.24
TUBGCP3-201ENST00000261965 DBF4Q9UBU7 674 aaPredicted RBP16.55■□□□□ 0.24
TUBGCP3-201ENST00000261965 CLIP2Q9UDT6 1046 aa16.55■□□□□ 0.24
TUBGCP3-201ENST00000261965 TPCN1Q9ULQ1 816 aa16.55■□□□□ 0.24
TUBGCP3-201ENST00000261965 PES1O00541 588 aaKnown RBP16.54■□□□□ 0.24
TUBGCP3-201ENST00000261965 CREB3L3Q68CJ9 461 aa16.54■□□□□ 0.24
TUBGCP3-201ENST00000261965 MYD88Q99836 296 aa16.54■□□□□ 0.24
TUBGCP3-201ENST00000261965 HYPKQ9NX55 129 aa16.54■□□□□ 0.24
TUBGCP3-201ENST00000261965 POLR3GO15318 223 aaPredicted RBP16.54■□□□□ 0.24
TUBGCP3-201ENST00000261965 ZNF165P49910 485 aa16.54■□□□□ 0.24
TUBGCP3-201ENST00000261965 A0A0D9SFI3 127 aa16.54■□□□□ 0.24
TUBGCP3-201ENST00000261965 LIG1P18858 919 aa16.54■□□□□ 0.24
TUBGCP3-201ENST00000261965 SLFNL1Q499Z3 407 aa16.54■□□□□ 0.24
TUBGCP3-201ENST00000261965 MTMR6Q9Y217 621 aa16.54■□□□□ 0.24
TUBGCP3-201ENST00000261965 VGLL3A8MV65 326 aa16.53■□□□□ 0.24
TUBGCP3-201ENST00000261965 KINO60870 393 aaKnown RBP16.53■□□□□ 0.24
TUBGCP3-201ENST00000261965 HS1BP3Q53T59 392 aa16.53■□□□□ 0.24
TUBGCP3-201ENST00000261965 RPAP1Q9BWH6 1393 aaPredicted RBP16.53■□□□□ 0.24
TUBGCP3-201ENST00000261965 JAK2O60674 1132 aa16.52■□□□□ 0.24
TUBGCP3-201ENST00000261965 NAA30Q147X3 362 aaPredicted RBP16.52■□□□□ 0.24
TUBGCP3-201ENST00000261965 RNF20Q5VTR2 975 aa16.52■□□□□ 0.24
TUBGCP3-201ENST00000261965 SEC62Q99442 399 aaKnown RBP16.52■□□□□ 0.24
TUBGCP3-201ENST00000261965 APPP05067 770 aa16.52■□□□□ 0.24
TUBGCP3-201ENST00000261965 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
TUBGCP3-201ENST00000261965 DDX46Q7L014 1031 aaKnown RBP16.52■□□□□ 0.24
TUBGCP3-201ENST00000261965 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.23
TUBGCP3-201ENST00000261965 CHST3Q7LGC8 479 aa16.52■□□□□ 0.23
TUBGCP3-201ENST00000261965 SIRT1Q96EB6 747 aa16.52■□□□□ 0.23
TUBGCP3-201ENST00000261965 ORAI2Q96SN7 254 aa16.52■□□□□ 0.23
TUBGCP3-201ENST00000261965 TTC6Q86TZ1 520 aa16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 THEMISQ8N1K5 641 aaPredicted RBP16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 PYCARDQ9ULZ3 195 aa16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 RICTORQ6R327 1708 aa16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 CCDC171Q6TFL3 1326 aa16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 NEXNQ0ZGT2 675 aa16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 MNS1Q8NEH6 495 aa16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 TTC14Q96N46 770 aa16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 BCL2L12Q9HB09 334 aa16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 CPLX1O14810 134 aa16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 POLA2Q14181 598 aa16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 CCDC94Q9BW85 323 aaPredicted RBP16.51■□□□□ 0.23
TUBGCP3-201ENST00000261965 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
TUBGCP3-201ENST00000261965 ZSWIM4Q9H7M6 989 aa16.5■□□□□ 0.23
TUBGCP3-201ENST00000261965 PTPRUQ92729 1446 aa16.5■□□□□ 0.23
TUBGCP3-201ENST00000261965 GRM8O00222 908 aa16.5■□□□□ 0.23
TUBGCP3-201ENST00000261965 WASHC4Q2M389 1173 aa16.5■□□□□ 0.23
TUBGCP3-201ENST00000261965 EVI5LQ96CN4 794 aa16.5■□□□□ 0.23
TUBGCP3-201ENST00000261965 ADAMTS13Q76LX8 1427 aa16.5■□□□□ 0.23
TUBGCP3-201ENST00000261965 COPS6Q7L5N1 327 aa16.5■□□□□ 0.23
TUBGCP3-201ENST00000261965 UBE3BQ7Z3V4 1068 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms