RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 TOM1L2Q6ZVM7 507 aa26.45■■□□□ 1.82
RNF39-201ENST00000244360 KCNB2Q92953 911 aa26.45■■□□□ 1.82
RNF39-201ENST00000244360 KCPQ6ZWJ8 1503 aa26.44■■□□□ 1.82
RNF39-201ENST00000244360 BRD1O95696 1058 aa26.44■■□□□ 1.82
RNF39-201ENST00000244360 RASEFQ8IZ41 740 aa26.44■■□□□ 1.82
RNF39-201ENST00000244360 NASPP49321 788 aaPredicted RBP26.43■■□□□ 1.82
RNF39-201ENST00000244360 CARD10Q9BWT7 1032 aa26.43■■□□□ 1.82
RNF39-201ENST00000244360 SNRKQ9NRH2 765 aa26.43■■□□□ 1.82
RNF39-201ENST00000244360 SHANK3Q9BYB0 1731 aa26.43■■□□□ 1.82
RNF39-201ENST00000244360 HIP1O00291 1037 aa26.43■■□□□ 1.82
RNF39-201ENST00000244360 CASP7P55210 303 aa26.43■■□□□ 1.82
RNF39-201ENST00000244360 PPP1R9BQ96SB3 815 aa26.43■■□□□ 1.82
RNF39-201ENST00000244360 TLR7Q9NYK1 1049 aaKnown RBP26.43■■□□□ 1.82
RNF39-201ENST00000244360 CCDC8Q9H0W5 538 aaPredicted RBP26.42■■□□□ 1.82
RNF39-201ENST00000244360 SIL1Q9H173 461 aa26.42■■□□□ 1.82
RNF39-201ENST00000244360 KLHDC4Q8TBB5 520 aa26.42■■□□□ 1.82
RNF39-201ENST00000244360 NBPF26B4DH59 902 aa26.41■■□□□ 1.82
RNF39-201ENST00000244360 NBPF14Q5TI25 921 aa26.41■■□□□ 1.82
RNF39-201ENST00000244360 NBPF10Q6P3W6 841 aaKnown RBP26.41■■□□□ 1.82
RNF39-201ENST00000244360 NBPF15Q8N660 670 aa26.41■■□□□ 1.82
RNF39-201ENST00000244360 TNS2Q63HR2 1409 aa26.41■■□□□ 1.82
RNF39-201ENST00000244360 PTH1RQ03431 593 aa26.4■■□□□ 1.82
RNF39-201ENST00000244360 PTPN12Q05209 780 aaKnown RBP26.4■■□□□ 1.82
RNF39-201ENST00000244360 NUP188Q5SRE5 1749 aa26.4■■□□□ 1.82
RNF39-201ENST00000244360 UBE3BQ7Z3V4 1068 aa26.4■■□□□ 1.82
RNF39-201ENST00000244360 IL2RBP14784 551 aa26.39■■□□□ 1.82
RNF39-201ENST00000244360 NOL8Q76FK4 1167 aaKnown RBP26.39■■□□□ 1.82
RNF39-201ENST00000244360 CCDC171Q6TFL3 1326 aa26.39■■□□□ 1.81
RNF39-201ENST00000244360 ZNF335Q9H4Z2 1342 aaPredicted RBP26.39■■□□□ 1.81
RNF39-201ENST00000244360 TM6SF1Q9BZW5 370 aa26.38■■□□□ 1.81
RNF39-201ENST00000244360 A0A087WZG4 1122 aa26.38■■□□□ 1.81
RNF39-201ENST00000244360 ATP5J2-PTCD1G3V325 749 aa26.37■■□□□ 1.81
RNF39-201ENST00000244360 PTCD1O75127 700 aaKnown RBP26.37■■□□□ 1.81
RNF39-201ENST00000244360 ZSCAN23Q3MJ62 389 aa26.37■■□□□ 1.81
RNF39-201ENST00000244360 NHSL1Q5SYE7 1610 aa26.36■■□□□ 1.81
RNF39-201ENST00000244360 AK2P54819 239 aa26.36■■□□□ 1.81
RNF39-201ENST00000244360 NECTIN1Q15223 517 aa26.36■■□□□ 1.81
RNF39-201ENST00000244360 CAVIN1Q6NZI2 390 aaKnown RBP26.36■■□□□ 1.81
RNF39-201ENST00000244360 H7C1W4 665 aa26.35■■□□□ 1.81
RNF39-201ENST00000244360 NMIQ13287 307 aaPredicted RBP26.35■■□□□ 1.81
RNF39-201ENST00000244360 JARID2Q92833 1246 aaPredicted RBP26.35■■□□□ 1.81
RNF39-201ENST00000244360 RUFY3Q7L099 469 aa26.35■■□□□ 1.81
RNF39-201ENST00000244360 LIMCH1Q9UPQ0 1083 aa26.35■■□□□ 1.81
RNF39-201ENST00000244360 MED23Q9ULK4 1368 aa26.34■■□□□ 1.81
RNF39-201ENST00000244360 TJP1Q07157 1748 aa26.34■■□□□ 1.81
RNF39-201ENST00000244360 NCLP19338 710 aaKnown RBP26.34■■□□□ 1.81
RNF39-201ENST00000244360 TNNI3KQ59H18 835 aa26.34■■□□□ 1.81
RNF39-201ENST00000244360 MAP4K1Q92918 833 aa26.34■■□□□ 1.81
RNF39-201ENST00000244360 FAM227BQ96M60 508 aa26.34■■□□□ 1.81
RNF39-201ENST00000244360 BOLA2Q9H3K6 86 aa26.34■■□□□ 1.81
RNF39-201ENST00000244360 FPGT-TNNI3KV9GXZ4 949 aa26.34■■□□□ 1.81
RNF39-201ENST00000244360 JCADQ9P266 1359 aa26.34■■□□□ 1.81
RNF39-201ENST00000244360 ATP5JP18859 108 aa26.34■■□□□ 1.81
RNF39-201ENST00000244360 ZSWIM6Q9HCJ5 1215 aa26.34■■□□□ 1.81
RNF39-201ENST00000244360 DBNLQ9UJU6 430 aaKnown RBP26.34■■□□□ 1.81
RNF39-201ENST00000244360 PRPF40AO75400 957 aaKnown RBP26.33■■□□□ 1.81
RNF39-201ENST00000244360 PRPF40BQ6NWY9 871 aaKnown RBP26.33■■□□□ 1.81
RNF39-201ENST00000244360 NAP1L5Q96NT1 182 aaPredicted RBP26.33■■□□□ 1.81
RNF39-201ENST00000244360 CASTP20810 708 aaKnown RBP26.33■■□□□ 1.8
RNF39-201ENST00000244360 TFCP2Q12800 502 aa26.33■■□□□ 1.8
RNF39-201ENST00000244360 VPS53Q5VIR6 699 aa26.33■■□□□ 1.8
RNF39-201ENST00000244360 RFX7Q2KHR2 1363 aa26.32■■□□□ 1.8
RNF39-201ENST00000244360 MBD3O95983 291 aa26.32■■□□□ 1.8
RNF39-201ENST00000244360 FOXO4P98177 505 aa26.32■■□□□ 1.8
RNF39-201ENST00000244360 TTLL7Q6ZT98 887 aa26.32■■□□□ 1.8
RNF39-201ENST00000244360 FSD1Q9BTV5 496 aa26.32■■□□□ 1.8
RNF39-201ENST00000244360 TOGARAM1Q9Y4F4 1720 aa26.32■■□□□ 1.8
RNF39-201ENST00000244360 GPT2Q8TD30 523 aa26.31■■□□□ 1.8
RNF39-201ENST00000244360 RBM8AQ9Y5S9 174 aaKnown RBP26.31■■□□□ 1.8
RNF39-201ENST00000244360 A0A0D9SFI3 127 aa26.31■■□□□ 1.8
RNF39-201ENST00000244360 CWC25Q9NXE8 425 aaPredicted RBP26.31■■□□□ 1.8
RNF39-201ENST00000244360 WDR33Q9C0J8 1336 aaKnown RBP26.31■■□□□ 1.8
RNF39-201ENST00000244360 RPAP1Q9BWH6 1393 aaPredicted RBP26.31■■□□□ 1.8
RNF39-201ENST00000244360 JAKMIP1Q96N16 626 aaKnown RBP26.3■■□□□ 1.8
RNF39-201ENST00000244360 A1BGP04217 495 aa26.3■■□□□ 1.8
RNF39-201ENST00000244360 ADCK5Q3MIX3 580 aa26.3■■□□□ 1.8
RNF39-201ENST00000244360 CREB3L3Q68CJ9 461 aa26.3■■□□□ 1.8
RNF39-201ENST00000244360 LMBR1LQ6UX01 489 aa26.3■■□□□ 1.8
RNF39-201ENST00000244360 HS1BP3Q53T59 392 aa26.29■■□□□ 1.8
RNF39-201ENST00000244360 CHAMP1Q96JM3 812 aa26.29■■□□□ 1.8
RNF39-201ENST00000244360 ZKSCAN1P17029 563 aaPredicted RBP26.29■■□□□ 1.8
RNF39-201ENST00000244360 FOXD4L5Q5VV16 416 aaPredicted RBP26.29■■□□□ 1.8
RNF39-201ENST00000244360 FOXD4L4Q8WXT5 416 aaPredicted RBP26.29■■□□□ 1.8
RNF39-201ENST00000244360 CYP46A1Q9Y6A2 500 aa26.29■■□□□ 1.8
RNF39-201ENST00000244360 DDX54Q8TDD1 881 aaKnown RBP26.28■■□□□ 1.8
RNF39-201ENST00000244360 PDRG1Q9NUG6 133 aa26.28■■□□□ 1.8
RNF39-201ENST00000244360 CPA1P15085 419 aa26.27■■□□□ 1.8
RNF39-201ENST00000244360 ZSCAN30Q86W11 494 aa26.27■■□□□ 1.8
RNF39-201ENST00000244360 CCDC191Q8NCU4 936 aa26.27■■□□□ 1.8
RNF39-201ENST00000244360 STRN4Q9NRL3 753 aa26.27■■□□□ 1.8
RNF39-201ENST00000244360 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.27■■□□□ 1.8
RNF39-201ENST00000244360 KDM4FA0A1W2PPD8 638 aa26.27■■□□□ 1.8
RNF39-201ENST00000244360 ZSCAN31Q96LW9 406 aaPredicted RBP26.26■■□□□ 1.79
RNF39-201ENST00000244360 SLC27A2O14975 620 aa26.26■■□□□ 1.79
RNF39-201ENST00000244360 EVA1CP58658 441 aa26.26■■□□□ 1.79
RNF39-201ENST00000244360 SH2B1Q9NRF2 756 aaPredicted RBP26.26■■□□□ 1.79
RNF39-201ENST00000244360 HAUS7Q99871 368 aa26.24■■□□□ 1.79
RNF39-201ENST00000244360 DBNDD2Q9BQY9 259 aa26.24■■□□□ 1.79
RNF39-201ENST00000244360 GPR108Q9NPR9 543 aa26.24■■□□□ 1.79
RNF39-201ENST00000244360 LARGE1O95461 756 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms