RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 LETM1O95202 739 aaPredicted RBP14.33□□□□□ -0.11
SEC61A1-201ENST00000243253 CSB-PGBD3P0DP91 1061 aa14.33□□□□□ -0.11
SEC61A1-201ENST00000243253 CASTP20810 708 aaKnown RBP14.33□□□□□ -0.11
SEC61A1-201ENST00000243253 IP6K1Q92551 441 aa14.33□□□□□ -0.11
SEC61A1-201ENST00000243253 TCEANC2Q96MN5 208 aa14.33□□□□□ -0.11
SEC61A1-201ENST00000243253 TPCN1Q9ULQ1 816 aa14.33□□□□□ -0.11
SEC61A1-201ENST00000243253 SASH1O94885 1247 aa14.33□□□□□ -0.12
SEC61A1-201ENST00000243253 GJB2P29033 226 aa14.33□□□□□ -0.12
SEC61A1-201ENST00000243253 DNM1Q05193 864 aaKnown RBP14.33□□□□□ -0.12
SEC61A1-201ENST00000243253 RBM43Q6ZSC3 357 aaKnown RBP14.33□□□□□ -0.12
SEC61A1-201ENST00000243253 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.33□□□□□ -0.12
SEC61A1-201ENST00000243253 TAF6LQ9Y6J9 622 aa14.33□□□□□ -0.12
SEC61A1-201ENST00000243253 NOLC1Q14978 699 aaKnown RBP eCLIP14.33□□□□□ -0.121e-8■□□□□ 8.2
SEC61A1-201ENST00000243253 MAP7D2Q96T17 732 aa14.33□□□□□ -0.12
SEC61A1-201ENST00000243253 GLRX3O76003 335 aaKnown RBP14.32□□□□□ -0.12
SEC61A1-201ENST00000243253 ARFGEF2Q9Y6D5 1785 aa14.32□□□□□ -0.12
SEC61A1-201ENST00000243253 HMGN5P82970 282 aaKnown RBP14.32□□□□□ -0.12
SEC61A1-201ENST00000243253 PROSER3Q2NL68 480 aa14.32□□□□□ -0.12
SEC61A1-201ENST00000243253 TTC12Q9H892 705 aaPredicted RBP14.32□□□□□ -0.12
SEC61A1-201ENST00000243253 ELP1O95163 1332 aa14.32□□□□□ -0.12
SEC61A1-201ENST00000243253 AFDNP55196 1824 aaKnown RBP14.32□□□□□ -0.12
SEC61A1-201ENST00000243253 KIAA1524Q8TCG1 905 aa14.32□□□□□ -0.12
SEC61A1-201ENST00000243253 PA2G4Q9UQ80 394 aaKnown RBP14.32□□□□□ -0.12
SEC61A1-201ENST00000243253 CCDC171Q6TFL3 1326 aa14.31□□□□□ -0.12
SEC61A1-201ENST00000243253 PDIA6Q15084 440 aa14.31□□□□□ -0.12
SEC61A1-201ENST00000243253 C17orf53Q8N3J3 647 aaPredicted RBP14.31□□□□□ -0.12
SEC61A1-201ENST00000243253 PRAMEF22A3QJZ6 481 aa14.31□□□□□ -0.12
SEC61A1-201ENST00000243253 PTMAP06454 111 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-201ENST00000243253 C9orf78Q9NZ63 289 aaPredicted RBP14.31□□□□□ -0.12
SEC61A1-201ENST00000243253 SLC39A6Q13433 755 aa14.3□□□□□ -0.12
SEC61A1-201ENST00000243253 GIMAP6Q6P9H5 292 aa14.3□□□□□ -0.12
SEC61A1-201ENST00000243253 FAM13BQ9NYF5 915 aa14.3□□□□□ -0.12
SEC61A1-201ENST00000243253 ZNF142P52746 1687 aaPredicted RBP14.3□□□□□ -0.12
SEC61A1-201ENST00000243253 TSGA10IPQ3SY00 556 aa14.3□□□□□ -0.12
SEC61A1-201ENST00000243253 TTC6Q86TZ1 520 aa14.3□□□□□ -0.12
SEC61A1-201ENST00000243253 CCDC83Q8IWF9 413 aa14.3□□□□□ -0.12
SEC61A1-201ENST00000243253 NDUFB9Q9Y6M9 179 aa14.3□□□□□ -0.12
SEC61A1-201ENST00000243253 TOB2Q14106 344 aaPredicted RBP14.3□□□□□ -0.12
SEC61A1-201ENST00000243253 PRIMPOLQ96LW4 560 aa14.3□□□□□ -0.12
SEC61A1-201ENST00000243253 ECHDC1Q9NTX5 307 aa14.3□□□□□ -0.12
SEC61A1-201ENST00000243253 ZNF530Q6P9A1 599 aaPredicted RBP14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 KLHDC4Q8TBB5 520 aa14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 SH2B1Q9NRF2 756 aaPredicted RBP14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 GIGYF1O75420 1035 aaPredicted RBP14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 CABLES1Q8TDN4 633 aa14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 FAM227BQ96M60 508 aa14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 CREB3L3Q68CJ9 461 aa14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 PRPF40BQ6NWY9 871 aaKnown RBP14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 EAF2Q96CJ1 260 aaPredicted RBP14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 PKNOX2Q96KN3 472 aa14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 CCDC85AQ96PX6 553 aaPredicted RBP14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 PDRG1Q9NUG6 133 aa14.29□□□□□ -0.12
SEC61A1-201ENST00000243253 ALDH1L1O75891 902 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 HSP90AB4PQ58FF6 505 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 CWF19L2Q2TBE0 894 aaKnown RBP14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 AKAP4Q5JQC9 854 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 USPL1Q5W0Q7 1092 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 CDC37L1Q7L3B6 337 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 EVI5LQ96CN4 794 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 ZSCAN31Q96LW9 406 aaPredicted RBP14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 NLRP2Q9NX02 1062 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 TLR7Q9NYK1 1049 aaKnown RBP14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 PYCARDQ9ULZ3 195 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 SMC3Q9UQE7 1217 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 MRVI1Q9Y6F6 885 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 COL18A1P39060 1754 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 ALS2Q96Q42 1657 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 TJP1Q07157 1748 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 LRP10Q7Z4F1 713 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 JAKMIP1Q96N16 626 aaKnown RBP14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 NUP188Q5SRE5 1749 aa14.28□□□□□ -0.12
SEC61A1-201ENST00000243253 SLC27A2O14975 620 aa14.27□□□□□ -0.12
SEC61A1-201ENST00000243253 FIBPO43427 364 aa14.27□□□□□ -0.12
SEC61A1-201ENST00000243253 MST1RQ04912 1400 aa14.27□□□□□ -0.12
SEC61A1-201ENST00000243253 MAP3K2Q9Y2U5 619 aa14.27□□□□□ -0.13
SEC61A1-201ENST00000243253 RBM8AQ9Y5S9 174 aaKnown RBP14.27□□□□□ -0.13
SEC61A1-201ENST00000243253 LAMB4A4D0S4 1761 aa14.27□□□□□ -0.13
SEC61A1-201ENST00000243253 A0A0D9SFI3 127 aa14.27□□□□□ -0.13
SEC61A1-201ENST00000243253 MTERF4Q7Z6M4 381 aaKnown RBP14.27□□□□□ -0.13
SEC61A1-201ENST00000243253 NWD2Q9ULI1 1742 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 LIG1P18858 919 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 KSR2Q6VAB6 950 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 TSC1Q92574 1164 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 SUCLG2Q96I99 432 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 DBF4Q9UBU7 674 aaPredicted RBP14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 CTIFO43310 598 aaKnown RBP14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 NMIQ13287 307 aaPredicted RBP14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 NECAB1Q8N987 351 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 ORAI2Q96SN7 254 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 CCDC8Q9H0W5 538 aaPredicted RBP14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 IGKV5-2P06315 115 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 STK3Q13188 491 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 CHRNA2Q15822 529 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 AEBP2Q6ZN18 517 aaPredicted RBP14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 FERMT3Q86UX7 667 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 CYP46A1Q9Y6A2 500 aa14.26□□□□□ -0.13
SEC61A1-201ENST00000243253 DNTTIP2Q5QJE6 756 aaKnown RBP14.25□□□□□ -0.13
SEC61A1-201ENST00000243253 ATP6V1DQ9Y5K8 247 aa14.25□□□□□ -0.13
SEC61A1-201ENST00000243253 VPS37CA5D8V6 355 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms