RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PA2G4Q9UQ80 394 aaKnown RBP26.8■■□□□ 1.88
CCDC9-201ENST00000221922 PLBD2Q8NHP8 589 aa26.79■■□□□ 1.88
CCDC9-201ENST00000221922 COL14A1Q05707 1796 aaKnown RBP26.79■■□□□ 1.88
CCDC9-201ENST00000221922 KIAA1211Q6ZU35 1233 aa26.78■■□□□ 1.88
CCDC9-201ENST00000221922 PIP4K2AP48426 406 aaPredicted RBP26.78■■□□□ 1.88
CCDC9-201ENST00000221922 IL25Q9H293 177 aa26.78■■□□□ 1.88
CCDC9-201ENST00000221922 NUP188Q5SRE5 1749 aa26.78■■□□□ 1.88
CCDC9-201ENST00000221922 COL22A1Q8NFW1 1626 aaPredicted RBP26.77■■□□□ 1.88
CCDC9-201ENST00000221922 AACSQ86V21 672 aa26.77■■□□□ 1.88
CCDC9-201ENST00000221922 DDX54Q8TDD1 881 aaKnown RBP26.77■■□□□ 1.88
CCDC9-201ENST00000221922 DIAPH3Q9NSV4 1193 aa26.77■■□□□ 1.88
CCDC9-201ENST00000221922 AHDC1Q5TGY3 1603 aaPredicted RBP26.76■■□□□ 1.87
CCDC9-201ENST00000221922 NBPF26B4DH59 902 aa26.76■■□□□ 1.87
CCDC9-201ENST00000221922 NBPF14Q5TI25 921 aa26.76■■□□□ 1.87
CCDC9-201ENST00000221922 NBPF10Q6P3W6 841 aaKnown RBP26.76■■□□□ 1.87
CCDC9-201ENST00000221922 NBPF15Q8N660 670 aa26.76■■□□□ 1.87
CCDC9-201ENST00000221922 LSG1Q9H089 658 aaKnown RBP26.76■■□□□ 1.87
CCDC9-201ENST00000221922 ROBO1Q9Y6N7 1651 aa26.75■■□□□ 1.87
CCDC9-201ENST00000221922 EVI5LQ96CN4 794 aa26.75■■□□□ 1.87
CCDC9-201ENST00000221922 NAP1L5Q96NT1 182 aaPredicted RBP26.74■■□□□ 1.87
CCDC9-201ENST00000221922 RBSNQ9H1K0 784 aa26.74■■□□□ 1.87
CCDC9-201ENST00000221922 SASH1O94885 1247 aa26.74■■□□□ 1.87
CCDC9-201ENST00000221922 CWC27Q6UX04 472 aaKnown RBP26.74■■□□□ 1.87
CCDC9-201ENST00000221922 MBD3O95983 291 aa26.73■■□□□ 1.87
CCDC9-201ENST00000221922 PRIM1P49642 420 aaKnown RBP26.73■■□□□ 1.87
CCDC9-201ENST00000221922 RABL6Q3YEC7 729 aaPredicted RBP26.72■■□□□ 1.87
CCDC9-201ENST00000221922 EPHA10Q5JZY3 1008 aa26.72■■□□□ 1.87
CCDC9-201ENST00000221922 RBM27Q9P2N5 1060 aaKnown RBP26.72■■□□□ 1.87
CCDC9-201ENST00000221922 PLCH1Q4KWH8 1693 aa26.72■■□□□ 1.87
CCDC9-201ENST00000221922 HIP1O00291 1037 aa26.72■■□□□ 1.87
CCDC9-201ENST00000221922 CHAMP1Q96JM3 812 aa26.72■■□□□ 1.87
CCDC9-201ENST00000221922 BTG4Q9NY30 223 aa26.72■■□□□ 1.87
CCDC9-201ENST00000221922 TMEM63CQ9P1W3 806 aa26.72■■□□□ 1.87
CCDC9-201ENST00000221922 ZSCAN30Q86W11 494 aa26.71■■□□□ 1.87
CCDC9-201ENST00000221922 UPF3BQ9BZI7 483 aaKnown RBP26.71■■□□□ 1.87
CCDC9-201ENST00000221922 DISP2A7MBM2 1401 aa26.71■■□□□ 1.87
CCDC9-201ENST00000221922 HS1BP3Q53T59 392 aa26.7■■□□□ 1.87
CCDC9-201ENST00000221922 COPRSQ9NQ92 184 aa26.7■■□□□ 1.87
CCDC9-201ENST00000221922 SNX14Q9Y5W7 946 aa26.7■■□□□ 1.87
CCDC9-201ENST00000221922 LRSAM1Q6UWE0 723 aa26.7■■□□□ 1.86
CCDC9-201ENST00000221922 PDLIM2Q96JY6 352 aa26.7■■□□□ 1.86
CCDC9-201ENST00000221922 COL16A1Q07092 1604 aaPredicted RBP26.69■■□□□ 1.86
CCDC9-201ENST00000221922 CASP7P55210 303 aa26.69■■□□□ 1.86
CCDC9-201ENST00000221922 UBE3BQ7Z3V4 1068 aa26.69■■□□□ 1.86
CCDC9-201ENST00000221922 EAF2Q96CJ1 260 aaPredicted RBP26.69■■□□□ 1.86
CCDC9-201ENST00000221922 TMOD3Q9NYL9 352 aa26.69■■□□□ 1.86
CCDC9-201ENST00000221922 NSFL1CQ9UNZ2 370 aaKnown RBP26.69■■□□□ 1.86
CCDC9-201ENST00000221922 TJP1Q07157 1748 aa26.69■■□□□ 1.86
CCDC9-201ENST00000221922 AEBP2Q6ZN18 517 aaPredicted RBP26.69■■□□□ 1.86
CCDC9-201ENST00000221922 A0A087WZG4 1122 aa26.68■■□□□ 1.86
CCDC9-201ENST00000221922 ATP5J2-PTCD1G3V325 749 aa26.68■■□□□ 1.86
CCDC9-201ENST00000221922 PTCD1O75127 700 aaKnown RBP26.68■■□□□ 1.86
CCDC9-201ENST00000221922 FOXD4L5Q5VV16 416 aaPredicted RBP26.68■■□□□ 1.86
CCDC9-201ENST00000221922 FOXD4L4Q8WXT5 416 aaPredicted RBP26.68■■□□□ 1.86
CCDC9-201ENST00000221922 RFX5P48382 616 aaPredicted RBP26.67■■□□□ 1.86
CCDC9-201ENST00000221922 LRP6O75581 1613 aa26.67■■□□□ 1.86
CCDC9-201ENST00000221922 A1BGP04217 495 aa26.66■■□□□ 1.86
CCDC9-201ENST00000221922 TTLL7Q6ZT98 887 aa26.66■■□□□ 1.86
CCDC9-201ENST00000221922 SIL1Q9H173 461 aa26.66■■□□□ 1.86
CCDC9-201ENST00000221922 ITGB4P16144 1822 aa26.66■■□□□ 1.86
CCDC9-201ENST00000221922 NOL8Q76FK4 1167 aaKnown RBP26.66■■□□□ 1.86
CCDC9-201ENST00000221922 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.66■■□□□ 1.86
CCDC9-201ENST00000221922 WNK3Q9BYP7 1800 aa26.65■■□□□ 1.86
CCDC9-201ENST00000221922 H7C1W4 665 aa26.65■■□□□ 1.86
CCDC9-201ENST00000221922 CCDC8Q9H0W5 538 aaPredicted RBP26.65■■□□□ 1.86
CCDC9-201ENST00000221922 TTC14Q96N46 770 aa26.64■■□□□ 1.86
CCDC9-201ENST00000221922 SYCE3A1L190 88 aa26.64■■□□□ 1.85
CCDC9-201ENST00000221922 PTPN12Q05209 780 aaKnown RBP26.64■■□□□ 1.85
CCDC9-201ENST00000221922 VSIG10Q8N0Z9 540 aa26.64■■□□□ 1.85
CCDC9-201ENST00000221922 KLHDC4Q8TBB5 520 aa26.64■■□□□ 1.85
CCDC9-201ENST00000221922 CWC25Q9NXE8 425 aaPredicted RBP26.64■■□□□ 1.85
CCDC9-201ENST00000221922 WDR33Q9C0J8 1336 aaKnown RBP26.63■■□□□ 1.85
CCDC9-201ENST00000221922 RASEFQ8IZ41 740 aa26.62■■□□□ 1.85
CCDC9-201ENST00000221922 JARID2Q92833 1246 aaPredicted RBP26.62■■□□□ 1.85
CCDC9-201ENST00000221922 KCNB2Q92953 911 aa26.62■■□□□ 1.85
CCDC9-201ENST00000221922 TEX13AQ9BXU3 409 aaPredicted RBP26.62■■□□□ 1.85
CCDC9-201ENST00000221922 CCDC171Q6TFL3 1326 aa26.61■■□□□ 1.85
CCDC9-201ENST00000221922 CCDC191Q8NCU4 936 aa26.61■■□□□ 1.85
CCDC9-201ENST00000221922 TM6SF1Q9BZW5 370 aa26.61■■□□□ 1.85
CCDC9-201ENST00000221922 SNRKQ9NRH2 765 aa26.61■■□□□ 1.85
CCDC9-201ENST00000221922 PIGBQ92521 554 aa26.61■■□□□ 1.85
CCDC9-201ENST00000221922 TLR7Q9NYK1 1049 aaKnown RBP26.6■■□□□ 1.85
CCDC9-201ENST00000221922 LIMCH1Q9UPQ0 1083 aa26.6■■□□□ 1.85
CCDC9-201ENST00000221922 FOXO4P98177 505 aa26.59■■□□□ 1.85
CCDC9-201ENST00000221922 PTH1RQ03431 593 aa26.59■■□□□ 1.85
CCDC9-201ENST00000221922 LTBP4Q8N2S1 1624 aa26.59■■□□□ 1.85
CCDC9-201ENST00000221922 MSNP26038 577 aaKnown RBP26.58■■□□□ 1.85
CCDC9-201ENST00000221922 AK2P54819 239 aa26.58■■□□□ 1.85
CCDC9-201ENST00000221922 SYAP1Q96A49 352 aaPredicted RBP26.58■■□□□ 1.85
CCDC9-201ENST00000221922 FSD1Q9BTV5 496 aa26.58■■□□□ 1.85
CCDC9-201ENST00000221922 BOLA2Q9H3K6 86 aa26.58■■□□□ 1.85
CCDC9-201ENST00000221922 NOL7Q9UMY1 257 aaKnown RBP26.58■■□□□ 1.85
CCDC9-201ENST00000221922 RPAP1Q9BWH6 1393 aaPredicted RBP26.58■■□□□ 1.85
CCDC9-201ENST00000221922 ZKSCAN1P17029 563 aaPredicted RBP26.58■■□□□ 1.84
CCDC9-201ENST00000221922 CASTP20810 708 aaKnown RBP26.58■■□□□ 1.84
CCDC9-201ENST00000221922 NMIQ13287 307 aaPredicted RBP26.58■■□□□ 1.84
CCDC9-201ENST00000221922 ZBTB3Q9H5J0 574 aa26.58■■□□□ 1.84
CCDC9-201ENST00000221922 ASAP1Q9ULH1 1129 aa26.58■■□□□ 1.84
CCDC9-201ENST00000221922 BCL9O00512 1426 aa26.57■■□□□ 1.84
CCDC9-201ENST00000221922 PRPF40BQ6NWY9 871 aaKnown RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms