RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 H2-BlV9GXR0 257 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 ArsbP50429 534 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Prdm1Q60636 856 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Tex2Q6ZPJ0 1128 aaKnown RBP6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Rxfp4Q7TQP4 414 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Sgsm1Q8BPQ7 1093 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Mkl1Q8K4J6 964 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Pcdhb13Q91Y06 796 aa6.52□□□□□ -1.37
Clk1-201ENSMUST00000034868 Rsf1E9PWW9 1441 aaKnown RBP6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 A930017K11RikE0CXQ2 571 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 Hoxb4P10284 250 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 Wnt7bP28047 349 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 Phactr1Q2M3X8 580 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 Q3UJC8 639 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 Dlx3Q64205 287 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 Yod1Q8CB27 343 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 Polr3dQ91WD1 398 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 Cyp2c50Q91X77 490 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 WaslQ91YD9 501 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 Tll2Q9WVM6 1012 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 Ercc6F8VPZ5 1481 aa6.51□□□□□ -1.37
Clk1-201ENSMUST00000034868 Cacna1iE9Q7P2 2199 aa6.5□□□□□ -1.37
Clk1-201ENSMUST00000034868 Mrc2Q64449 1479 aa6.5□□□□□ -1.37
Clk1-201ENSMUST00000034868 Tnnt2P50752 301 aa6.5□□□□□ -1.37
Clk1-201ENSMUST00000034868 Gsdma3Q5Y4Y6 464 aa6.5□□□□□ -1.37
Clk1-201ENSMUST00000034868 Gpr153Q8K0Z9 631 aa6.5□□□□□ -1.37
Clk1-201ENSMUST00000034868 Hs2st1Q8R3H7 356 aa6.5□□□□□ -1.37
Clk1-201ENSMUST00000034868 Elp3Q9CZX0 547 aa6.5□□□□□ -1.37
Clk1-201ENSMUST00000034868 Gm44503E9PYU5 387 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 CanxP35564 591 aaKnown RBP6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Epb42P49222 691 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Tnks2Q3UES3 1166 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Adamts18Q4VC17 1219 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Krt72Q6IME9 520 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Ankrd13aQ80UP5 588 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Gk5Q8BX05 534 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 OptnQ8K3K8 584 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Kbtbd4Q8R179 534 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Dnaaf4Q8R368 420 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 ApobrQ8VBT6 942 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Nr2e3Q9QXZ7 395 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Kcnb2A6H8H5 907 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Gm7361D3Z6R1 267 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Pde4aO89084 844 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Dlgap3Q6PFD5 977 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Nim1kQ8BHI9 436 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Phf20l1Q8CCJ9 1013 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Prmt3Q922H1 532 aa6.49□□□□□ -1.37
Clk1-201ENSMUST00000034868 Wscd2D4PHA7 571 aa6.48□□□□□ -1.37
Clk1-201ENSMUST00000034868 Pik3cdO35904 1043 aa6.48□□□□□ -1.37
Clk1-201ENSMUST00000034868 Stim2P83093 746 aa6.48□□□□□ -1.37
Clk1-201ENSMUST00000034868 GphnQ8BUV3 769 aaKnown RBP6.48□□□□□ -1.37
Clk1-201ENSMUST00000034868 Gipc1Q9Z0G0 333 aa6.48□□□□□ -1.37
Clk1-201ENSMUST00000034868 Sbno2Q7TNB8 1349 aa6.48□□□□□ -1.37
Clk1-201ENSMUST00000034868 NmiO35309 314 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 Foxk1P42128 719 aaKnown RBP6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 Anapc15P60007 132 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 MpripP97434 1024 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 KhsrpQ3U0V1 748 aaKnown RBP6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 Kiaa0319Q5SZV5 1081 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 Mybpc2Q5XKE0 1136 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 Nlrp10Q8CCN1 673 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 Crispld1Q8CGD2 500 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 Rell1Q8K2J7 272 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 Amhr2Q8K592 568 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 Eps8l3Q91WL0 600 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 Sept6Q9R1T4 434 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 Sycp2Q9CUU3 1500 aa6.47□□□□□ -1.37
Clk1-201ENSMUST00000034868 JundP15066 341 aa6.46□□□□□ -1.37
Clk1-201ENSMUST00000034868 AaasP58742 546 aa6.46□□□□□ -1.37
Clk1-201ENSMUST00000034868 Lrig3Q6P1C6 1117 aa6.46□□□□□ -1.37
Clk1-201ENSMUST00000034868 PoliQ6R3M4 717 aa6.46□□□□□ -1.37
Clk1-201ENSMUST00000034868 Ccdc38Q8CDN8 563 aa6.46□□□□□ -1.37
Clk1-201ENSMUST00000034868 Fam129bQ8R1F1 749 aa6.46□□□□□ -1.37
Clk1-201ENSMUST00000034868 Znf622Q91VY9 476 aa6.46□□□□□ -1.37
Clk1-201ENSMUST00000034868 F11Q91Y47 624 aa6.46□□□□□ -1.37
Clk1-201ENSMUST00000034868 Tor1aip1Q921T2 595 aaKnown RBP6.46□□□□□ -1.37
Clk1-201ENSMUST00000034868 Ssfa2Q922B9 1252 aa6.46□□□□□ -1.37
Clk1-201ENSMUST00000034868 Cog1Q9Z160 980 aa6.46□□□□□ -1.37
Clk1-201ENSMUST00000034868 Jdp2P97875 163 aa6.46□□□□□ -1.38
Clk1-201ENSMUST00000034868 Ddx46Q569Z5 1032 aaKnown RBP6.46□□□□□ -1.38
Clk1-201ENSMUST00000034868 Klhl42Q8BFQ9 493 aa6.46□□□□□ -1.38
Clk1-201ENSMUST00000034868 Q8BP99 230 aa6.46□□□□□ -1.38
Clk1-201ENSMUST00000034868 Serinc2Q8K0E7 450 aa6.46□□□□□ -1.38
Clk1-201ENSMUST00000034868 Lman1Q9D0F3 517 aa6.46□□□□□ -1.38
Clk1-201ENSMUST00000034868 Phf14Q9D4H9 881 aa6.46□□□□□ -1.38
Clk1-201ENSMUST00000034868 Add1Q9QYC0 735 aaKnown RBP6.46□□□□□ -1.38
Clk1-201ENSMUST00000034868 Serpinb6cW4VSP4 379 aa6.46□□□□□ -1.38
Clk1-201ENSMUST00000034868 Lrriq1Q0P5X1 1673 aa6.46□□□□□ -1.38
Clk1-201ENSMUST00000034868 Gm7544A0A1Y7VJ58 118 aa6.45□□□□□ -1.38
Clk1-201ENSMUST00000034868 Efr3bQ6ZQ18 817 aa6.45□□□□□ -1.38
Clk1-201ENSMUST00000034868 Foxo6Q70KY4 559 aa6.45□□□□□ -1.38
Clk1-201ENSMUST00000034868 Slc5a1Q8C3K6 665 aa6.45□□□□□ -1.38
Clk1-201ENSMUST00000034868 Snrnp27Q8K194 155 aa6.45□□□□□ -1.38
Clk1-201ENSMUST00000034868 Ascc2Q91WR3 749 aa6.45□□□□□ -1.38
Clk1-201ENSMUST00000034868 Pcdhb2Q91Y00 799 aa6.45□□□□□ -1.38
Clk1-201ENSMUST00000034868 CsadQ9DBE0 493 aa6.45□□□□□ -1.38
Clk1-201ENSMUST00000034868 Ms4a4bQ9ES61 226 aa6.45□□□□□ -1.38
Clk1-201ENSMUST00000034868 Eif2ak3Q9Z2B5 1114 aa6.45□□□□□ -1.38
Clk1-201ENSMUST00000034868 Gm13101A2ASJ0 481 aa6.44□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms