RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 TEX19Q8NA77 164 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 HGDQ93099 445 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 MCUR1Q96AQ8 359 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 UTP23Q9BRU9 249 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 MTHFD2LQ9H903 347 aaPredicted RBP18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 HPF1Q9NWY4 346 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 MKLN1Q9UL63 735 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 COL6A6A6NMZ7 2263 aa18.22■□□□□ 0.51
PDLIM2-221ENST00000622702 HS6ST1O60243 411 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 DPM1O60762 260 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 WDPCPO95876 746 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 NGFRP08138 427 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 ETS2P15036 469 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 ME2P23368 584 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 CASRP41180 1078 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 KLRB1Q12918 225 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 BNIP2Q12982 314 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 TUBA3CQ13748 450 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 FLYWCH1Q4VC44 716 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 TUBA3EQ6PEY2 450 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 IL20RBQ6UXL0 311 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 CCDC80Q76M96 950 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 FBXW8Q8N3Y1 598 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 GOLM1Q8NBJ4 401 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 FAM156AQ8NDB6 213 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 OIT3Q8WWZ8 545 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 TM9SF4Q92544 642 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 HAS2Q92819 552 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 CLPTM1LQ96KA5 538 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 SECISBP2Q96T21 854 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 HOXD1Q9GZZ0 328 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 SH2D2AQ9NP31 389 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 UBQLN4Q9NRR5 601 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 SPTA1P02549 2419 aa18.21■□□□□ 0.51
PDLIM2-221ENST00000622702 TP53I11O14683 189 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 PDE5AO76074 875 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 UTS2O95399 124 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 TCN1P20061 433 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 CD96P40200 585 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 ATP12AP54707 1039 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 C19orf57Q0VDD7 668 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 GPR68Q15743 365 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 RPS26P11Q5JNZ5 115 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 COLEC12Q5KU26 742 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 DESI1Q6ICB0 168 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 IGFL3Q6UXB1 125 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 RTL4Q6ZR62 310 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 ZNF227Q86WZ6 799 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 ULK2Q8IYT8 1036 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 CYP4Z2PQ8N1L4 340 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 OR10G3Q8NGC4 313 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 RNF138Q8WVD3 245 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 TMCO6Q96DC7 493 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 MFRPQ9BY79 579 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 SUCOQ9UBS9 1254 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 OR5H15A6NDH6 313 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 B8ZZF3 427 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 ICOSLGO75144 302 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 GCM2O75603 506 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 PDE9AO76083 593 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 GGT1P19440 569 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 TBXA2RP21731 343 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 RPS4Y1P22090 263 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 DCTP40126 519 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 CD97P48960 835 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 ST13P50502 369 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 RPP38P78345 283 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 OC90Q02509 493 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 ZNF141Q15928 474 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 NADK2Q4G0N4 442 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 TMEM81Q6P7N7 255 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 PATL1Q86TB9 770 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 KRT73Q86Y46 540 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 ZADH2Q8N4Q0 377 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 RBMXL3Q8N7X1 1067 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 FAM13CQ8NE31 585 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 OR4C3Q8NH37 302 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 SPPL2AQ8TCT8 520 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 PAQR8Q8TEZ7 354 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 ANKRD10Q9NXR5 420 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 PLA2G3Q9NZ20 509 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 LRFN1Q9P244 771 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 EGFL7Q9UHF1 273 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 ABCG2Q9UNQ0 655 aa18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 GPC6Q9Y625 555 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 CHCHD2Q9Y6H1 151 aaPredicted RBP18.2■□□□□ 0.5
PDLIM2-221ENST00000622702 SPENQ96T58 3664 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 AGAP5A6NIR3 686 aa18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 CXCR6O00574 342 aa18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 GSTA4O15217 222 aa18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 UGT2B17O75795 530 aa18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 NEURL1O76050 574 aa18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 AQP1P29972 269 aa18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 MSX2P35548 267 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 TRIM25Q14258 630 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 GRAMD1BQ3KR37 738 aa18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 OR5M3Q8NGP4 307 aa18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 ZG16BQ96DA0 208 aa18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 NODALQ96S42 347 aa18.19■□□□□ 0.5
PDLIM2-221ENST00000622702 ZNF607Q96SK3 696 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms