RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 RAB3IL1Q8TBN0 382 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 STACQ99469 402 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 SPOCK3Q9BQ16 436 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 TREX2Q9BQ50 279 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 PIGUQ9H490 435 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 MANSC1Q9H8J5 431 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 KCNJ16Q9NPI9 418 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 SDHAF3Q9NRP4 125 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 DUSP22Q9NRW4 184 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 GIN1Q9NXP7 522 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 NKIRAS1Q9NYS0 192 aa16.77■□□□□ 0.28
SHKBP1-202ENST00000593764 IGLV3-32A0A0A0MS00 114 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 ANGPTL1O95841 491 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 NGFRP08138 427 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 ALDOCP09972 364 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 IGFBP2P18065 325 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 TIMP3P35625 211 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 STARP49675 285 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 LHX2P50458 406 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 CCNJQ5T5M9 372 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 ATG16L1Q676U5 607 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 CDC73Q6P1J9 531 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 LACC1Q8IV20 430 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 WDR75Q8IWA0 830 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 CLECL1Q8IZS7 167 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 ZNF295-AS1Q8N0V1 137 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 COX18Q8N8Q8 333 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 OR56A1Q8NGH5 318 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 ZPLD1Q8TCW7 415 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 SFXN5Q8TD22 340 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 JADE3Q92613 823 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 G6PC3Q9BUM1 346 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 BTBD2Q9BX70 525 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 ACTRT3Q9BYD9 372 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 TBL1XR1Q9BZK7 514 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 TRIM8Q9BZR9 551 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 DPY30Q9C005 99 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 NEUROD4Q9HD90 331 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 DKKL1Q9UK85 242 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 RPH3AQ9Y2J0 694 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 KCNE3Q9Y6H6 103 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 CSMD1Q96PZ7 3565 aa16.76■□□□□ 0.27
SHKBP1-202ENST00000593764 CD8B2A6NJW9 211 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 ALG1L2C9J202 215 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 FAM47E-STBD1D6RA91 191 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 RNASET2O00584 256 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 HDAC3O15379 428 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 CFLARO15519 480 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 OXSR1O95747 527 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 KITP10721 976 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 TBXA2RP21731 343 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 TCEA1P23193 301 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 CHMP24386 653 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 MSX1P28360 303 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 CLK3P49761 638 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 POU6F2P78424 691 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 C17orf67Q0P5P2 114 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 TP53BP2Q13625 1128 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 AAGABQ6PD74 315 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 POMZP3Q6PJE2 187 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 ENPP6Q6UWR7 440 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 ADGRE4PQ86SQ3 457 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 OR5AK3PQ8NH89 298 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 CDS1Q92903 461 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 TESCQ96BS2 214 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 DTNBP1Q96EV8 351 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 TEX37Q96LM6 180 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 TUBA1CQ9BQE3 449 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 WDR55Q9H6Y2 383 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 CALHM2Q9HA72 323 aa16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 MARCOQ9UEW3 520 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-202ENST00000593764 TACC2O95359 2948 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 HSPB2A8KAH6 182 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 EPHA3P29320 983 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 LCN1P31025 176 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 GCKP35557 465 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 CLDN18P56856 261 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 SRYQ05066 204 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 SF3B4Q15427 424 aaKnown RBP eCLIP16.74■□□□□ 0.271e-6■■■■■ 60
SHKBP1-202ENST00000593764 HSPB2Q16082 182 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 SPDYE7PQ495Y7 208 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 CLEC4FQ8N1N0 589 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 ZNF75CPQ92670 426 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 MOAP1Q96BY2 351 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 C1GALT1C1Q96EU7 318 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 SFXN2Q96NB2 322 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 TRIB1Q96RU8 372 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 RUBCNLQ9H714 662 aa16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 FAF1Q9UNN5 650 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-202ENST00000593764 GOLGA8QA0A0J9YX86 632 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 PRSS51A0A1B0GVH4 220 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 GOLGA8OA6NCC3 632 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 MBD3L4A6NDZ8 208 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 MBD3L3A6NE82 208 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 MBD3L5A6NJ08 208 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 GOLGA8NF8WBI6 632 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 KLF11O14901 512 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 ZNF708P17019 499 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 HK1P19367 917 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 UFM1P61960 85 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms