RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 GRAMD1BQ3KR37 738 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 OR2A2Q6IF42 318 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 LRIG3Q6UXM1 1119 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 ZCCHC23Q6ZST2 131 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 SZRD1Q7Z422 152 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 R3HCC1LQ7Z5L2 792 aaKnown RBP14.34□□□□□ -0.11
CRLF3-203ENST00000578692 OR5M1Q8NGP8 315 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 C1GALT1C1Q96EU7 318 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 GIMAP5Q96F15 307 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 FOXC2Q99958 501 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 PACSIN3Q9UKS6 424 aa14.34□□□□□ -0.11
CRLF3-203ENST00000578692 F8P00451 2351 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 IGLV3-32A0A0A0MS00 114 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 A0A1W2PNV4 684 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 SLC22A20A6NK97 555 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 TMEM114B3SHH9 223 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 H0YC42 278 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 H3BML4 177 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 PEX11AO75192 247 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 TNFRSF21O75509 655 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 TNFSF13O75888 250 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 ACP2P11117 423 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 DDX5P17844 614 aaKnown RBP14.33□□□□□ -0.12
CRLF3-203ENST00000578692 DNASE1P24855 282 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 TPD52P55327 224 aaPredicted RBP14.33□□□□□ -0.12
CRLF3-203ENST00000578692 ZCCHC12Q6PEW1 402 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 GALNT10Q86SR1 603 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 SLC16A11Q8NCK7 471 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 OR4C3Q8NH37 302 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 FAM110BQ8TC76 370 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 AGR3Q8TD06 166 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 PPP3R2Q96LZ3 170 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 MS4A4EQ96PG1 132 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 YIPF4Q9BSR8 244 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 ATP6V1HQ9UI12 483 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 MED13LQ71F56 2210 aa14.33□□□□□ -0.12
CRLF3-203ENST00000578692 ALG1L2C9J202 215 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 MSTNO14793 375 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 SEC14L5O43304 696 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 NDUFB5O43674 189 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 GMFGO60234 142 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 KCNK2O95069 426 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 GOSR1O95249 250 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 SLU7O95391 586 aaKnown RBP14.32□□□□□ -0.12
CRLF3-203ENST00000578692 ALOX5P09917 674 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 EFNA1P20827 205 aaPredicted RBP14.32□□□□□ -0.12
CRLF3-203ENST00000578692 TBXA2RP21731 343 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 MAPK1P28482 360 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 SERPINB5P36952 375 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 RPL3P39023 403 aaKnown RBP14.32□□□□□ -0.12
CRLF3-203ENST00000578692 CLDN20P56880 219 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 MLC1Q15049 377 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 MFSD12Q6NUT3 480 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 FIGNL1Q6PIW4 674 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 CNEP1R1Q8N9A8 125 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 OR6Y1Q8NGX8 325 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 FBXO30Q8TB52 745 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 FIG4Q92562 907 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 STARD4Q96DR4 205 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 C16orf58Q96GQ5 468 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 DACH2Q96NX9 599 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 PINK1Q9BXM7 581 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 CXXC4Q9H2H0 198 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 HHATLQ9HCP6 504 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 GIMAP2Q9UG22 337 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 NDRG3Q9UGV2 375 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 ZDHHC2Q9UIJ5 367 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 PLEKHA6Q9Y2H5 1048 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 AP4B1Q9Y6B7 739 aa14.32□□□□□ -0.12
CRLF3-203ENST00000578692 CELSR1Q9NYQ6 3014 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 SPG11Q96JI7 2443 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 TEP1Q99973 2627 aaKnown RBP14.31□□□□□ -0.12
CRLF3-203ENST00000578692 A0A1W2PRB8 838 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 SCAMP2O15127 329 aaKnown RBP14.31□□□□□ -0.12
CRLF3-203ENST00000578692 SMNDC1O75940 238 aaKnown RBP eCLIP14.31□□□□□ -0.12
CRLF3-203ENST00000578692 OXSR1O95747 527 aaPredicted RBP14.31□□□□□ -0.12
CRLF3-203ENST00000578692 NGFRP08138 427 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 CREB1P16220 341 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 HPCAL1P37235 193 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 SERPINB4P48594 390 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 PRIM2P49643 509 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 RIPPLY3P57055 190 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 RPS3AP61247 264 aaKnown RBP14.31□□□□□ -0.12
CRLF3-203ENST00000578692 DUSP5Q16690 384 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.31□□□□□ -0.12
CRLF3-203ENST00000578692 ATP6AP1LQ52LC2 224 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 XKR7Q5GH72 579 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 VWA1Q6PCB0 445 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 EMBQ6PCB8 327 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 OR7A2PQ8NGA2 310 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 AENQ8WTP8 325 aaKnown RBP14.31□□□□□ -0.12
CRLF3-203ENST00000578692 SMPDL3BQ92485 455 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 FAM120BQ96EK7 910 aaKnown RBP14.31□□□□□ -0.12
CRLF3-203ENST00000578692 PGM2Q96G03 612 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 C3orf30Q96M34 536 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 ZCCHC3Q9NUD5 404 aaKnown RBP14.31□□□□□ -0.12
CRLF3-203ENST00000578692 FBXO34Q9NWN3 711 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 STOML1Q9UBI4 398 aa14.31□□□□□ -0.12
CRLF3-203ENST00000578692 VDAC3Q9Y277 283 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms