RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 HMGN2P46Q86SG4 172 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 COMTD1Q86VU5 262 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 NAXDQ8IW45 347 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 CMIPQ8IY22 773 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 PARP8Q8N3A8 854 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 CLIP4Q8N3C7 705 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 SLC2A12Q8TD20 617 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 LRFN5Q96NI6 719 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 MCHR1Q99705 422 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 ITPAQ9BY32 194 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 STRADBQ9C0K7 418 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 OR8D2Q9GZM6 311 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 SLC26A1Q9H2B4 701 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 SOX17Q9H6I2 414 aaPredicted RBP12.77□□□□□ -0.37
TPM1-215ENST00000558868 TMEM9BQ9NQ34 198 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 SLC22A11Q9NSA0 550 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 RXFP3Q9NSD7 469 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 CTSFQ9UBX1 484 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 GPN3Q9UHW5 284 aaPredicted RBP12.77□□□□□ -0.37
TPM1-215ENST00000558868 NXT1Q9UKK6 140 aaKnown RBP12.77□□□□□ -0.37
TPM1-215ENST00000558868 GMPPBQ9Y5P6 360 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 FAM186AA6NE01 2351 aa12.77□□□□□ -0.37
TPM1-215ENST00000558868 TRBV4-1A0A0J9YWV2 114 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 SH3PXD2BA1X283 911 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 CDHR4A6H8M9 788 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 FRG2CA6NGY1 282 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 VSTM2BA6NLU5 285 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 EIF4E1BA6NMX2 242 aaKnown RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 OR10H3O60404 316 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 CYP7B1O75881 506 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 SEC24DO94855 1032 aaPredicted RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 TIAF1O95411 115 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 CLIC3O95833 236 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 DDAH2O95865 285 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 CLPSP04118 112 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 KLK3P07288 261 aaPredicted RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 CT45A8P0DMV1 189 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 CT45A9P0DMV2 189 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 CD59P13987 128 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 ATP12AP54707 1039 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 NUP107P57740 925 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 ESRRGP62508 458 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 COX10Q12887 443 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 NPTX1Q15818 432 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 CT45A2Q5DJT8 189 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 RBM48Q5RL73 367 aaKnown RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 MRPL2Q5T653 305 aaKnown RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 ZNF385CQ66K41 422 aaPredicted RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 SLC29A4Q7RTT9 530 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 B3GNT8Q7Z7M8 397 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 TSPYL5Q86VY4 417 aaPredicted RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 GRAMD2AQ8IUY3 354 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 PRSS58Q8IYP2 241 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 BCORP1Q8N888 145 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 BMPERQ8N8U9 685 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 AQP11Q8NBQ7 271 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 TSPAN14Q8NG11 270 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 OR1N1Q8NGS0 311 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 ZNF721Q8TF20 911 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 HDAC2Q92769 488 aaKnown RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 ATOH1Q92858 354 aaPredicted RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 LCORQ96JN0 433 aaPredicted RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 PITX2Q99697 317 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 CMKLR1Q99788 373 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 ZNF559Q9BR84 538 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 FUZQ9BT04 418 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 DGCR6LQ9BY27 220 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 UCK2Q9BZX2 261 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 KRCC1Q9NPI7 259 aaPredicted RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 FBXO34Q9NWN3 711 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 TUBA8Q9NY65 449 aaPredicted RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 C19orf25Q9UFG5 118 aaPredicted RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 TESQ9UGI8 421 aaKnown RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 BLOC1S6Q9UL45 172 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 NDRG4Q9ULP0 352 aaKnown RBP12.76□□□□□ -0.37
TPM1-215ENST00000558868 PCDHGB5Q9Y5G0 923 aa12.76□□□□□ -0.37
TPM1-215ENST00000558868 A0A087WXM4 84 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 C2orf92A0A1B0GVN3 265 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 MEN1O00255 615 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 PEX12O00623 359 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 ACACBO00763 2458 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 SEMA7AO75326 666 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 ALOX12BO75342 701 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 CLPTM1O96005 669 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 CD63P08962 238 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 GSTM3P21266 225 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 KRT20P35900 424 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 RFX3P48380 749 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 EMP2P54851 167 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 RAB15P59190 212 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 TUBA4AP68366 448 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 RPP38P78345 283 aaKnown RBP12.75□□□□□ -0.37
TPM1-215ENST00000558868 MAPK14Q16539 360 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 ENTPD8Q5MY95 495 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 ZNF770Q6IQ21 691 aaPredicted RBP12.75□□□□□ -0.37
TPM1-215ENST00000558868 PODNL1Q6PEZ8 512 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 RRM2BQ7LG56 351 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 ASCL5Q7RTU5 278 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 ZNF550Q7Z398 422 aa12.75□□□□□ -0.37
TPM1-215ENST00000558868 LAPTM4BQ86VI4 370 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms