RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 C9orf64Q5T6V5 341 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 CD276Q5ZPR3 534 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 MEX3DQ86XN8 651 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 RNF113BQ8IZP6 322 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF567Q8N184 647 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF610Q8N9Z0 462 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 CLEC4DQ8WXI8 215 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 UCN3Q969E3 161 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 NT5C3BQ969T7 300 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 URM1Q9BTM9 101 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 PRDM12Q9H4Q4 367 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 IGFLR1Q9H665 355 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 CALML5Q9NZT1 146 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 PCDHB10Q9UN67 800 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 GAB2Q9UQC2 676 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 NME7Q9Y5B8 376 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 PCDHB9Q9Y5E1 797 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 ABCC3O15438 1527 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 DUOX2Q9NRD8 1548 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SHROOM2Q13796 1616 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 TRAPPC13A5PLN9 417 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 DLEU1O43261 78 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SFTA3P0C7M3 94 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 ARAFP10398 606 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 HNRNPA3P51991 378 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 ADARB1P78563 741 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 TMEM41BQ5BJD5 291 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 RNLSQ5VYX0 342 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 OR2T5Q6IEZ7 315 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 CEACAM20Q6UY09 585 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 MEX3BQ6ZN04 569 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF813Q6ZN06 617 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 OR2T29Q8NH02 315 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 BBS10Q8TAM1 723 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 BCL2L2Q92843 193 aaPredicted RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 NELFAQ9H3P2 528 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 KLK14Q9P0G3 267 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 FEM1BQ9UK73 627 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 TSPAN16Q9UKR8 245 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 NCAPD2Q15021 1401 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 MEX3AA1L020 520 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 TLX2O43763 284 aaPredicted RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 HPRP00739 348 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 STAG3L1P0CL83 205 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 CHATP28329 748 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 HOXA7P31268 230 aaPredicted RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 ID2Q02363 134 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 DPY19L2P1Q6NXN4 242 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SUMF2Q8NBJ7 301 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 FKBP10Q96AY3 582 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 NSUN4Q96CB9 384 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 PPP1R16AQ96I34 528 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SEC22AQ96IW7 307 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 OR5M11Q96RB7 305 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 SAMD10Q9BYL1 202 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 WDCPQ9H6R7 721 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 CERS4Q9HA82 394 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 PATZ1Q9HBE1 687 aaKnown RBP8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 GPR173Q9NS66 373 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 NRKQ7Z2Y5 1582 aa8.51□□□□□ -1.05
GTF2A1-203ENST00000553612 METP08581 1390 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 A0A0D9SG52 128 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 OR1I1O60431 355 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 RECKO95980 971 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ANKRD34CP0C6C1 535 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 GALP22466 123 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ETV6P41212 452 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 CAMLGP49069 296 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 SCAND1P57086 179 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 RPL23AP62750 156 aaKnown RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 MELKQ14680 651 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 CLEC12BQ2HXU8 276 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ADNP2Q6IQ32 1131 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 RANBP10Q6VN20 620 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 C19orf35Q6ZS72 473 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF627Q7L945 461 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ADGRF3Q8IZF5 1079 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 NANOGP1Q8N7R0 232 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 TEPSINQ96N21 525 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ASB16Q96NS5 453 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 MOKQ9UQ07 419 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ADCY10Q96PN6 1610 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 OR51F1A6NGY5 319 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 TTRP02766 147 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 BUD31P41223 144 aaPredicted RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 HMGCS1Q01581 520 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 IRF3Q14653 427 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ZNF684Q5T5D7 378 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 SYT6Q5T7P8 510 aaPredicted RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 MRNIPQ6NTE8 343 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 CHST4Q8NCG5 386 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 GPRC5AQ8NFJ5 357 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 ZBED6CLQ96FA7 236 aaPredicted RBP8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 HPDLQ96IR7 371 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 KLHL15Q96M94 604 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 SLC6A7Q99884 636 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 OR11A1Q9GZK7 315 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 SMOC2Q9H3U7 446 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 SERTAD3Q9UJW9 196 aa8.5□□□□□ -1.05
GTF2A1-203ENST00000553612 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.5□□□□□ -1.055e-6■■■□□ 19
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms