RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 MAP3K8P41279 467 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 MRPS22P82650 360 aaKnown RBP10.69□□□□□ -0.7
GABPB1-206ENST00000543881 HSPB3Q12988 150 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 STX5Q13190 355 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 BCL2A1Q16548 175 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 ACKR1Q16570 336 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 DECR1Q16698 335 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 RFTN2Q52LD8 501 aaPredicted RBP10.69□□□□□ -0.7
GABPB1-206ENST00000543881 MARCH3Q86UD3 253 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 GRAMD2AQ8IUY3 354 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 OR2W6PQ8NHA6 318 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 DUSP19Q8WTR2 217 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 PIK3R3Q92569 461 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 HOXB13Q92826 284 aaPredicted RBP10.69□□□□□ -0.7
GABPB1-206ENST00000543881 METTL2AQ96IZ6 378 aaKnown RBP10.69□□□□□ -0.7
GABPB1-206ENST00000543881 ZFP3Q96NJ6 502 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 PPCSQ9HAB8 311 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 UBTD1Q9HAC8 227 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 BAIAP2L1Q9UHR4 511 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 FIS1Q9Y3D6 152 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 ZNF337Q9Y3M9 751 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 TESMINQ9Y4I5 508 aa10.69□□□□□ -0.7
GABPB1-206ENST00000543881 A0A1W2PNV4 684 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 A8MXE2 369 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 TMEM233B4DJY2 109 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 SLC28A1O00337 649 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 AZIN1O14977 448 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 PDPK1O15530 556 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 SIAH2O43255 324 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 CTIFO43310 598 aaKnown RBP10.68□□□□□ -0.7
GABPB1-206ENST00000543881 AKAP10O43572 662 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 CNOT4O95628 575 aaKnown RBP10.68□□□□□ -0.7
GABPB1-206ENST00000543881 CHRNGP07510 517 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 IFI6P09912 130 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 LINC00032P0C843 101 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 HK1P19367 917 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 GABRA3P34903 492 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 RFX3P48380 749 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 SUCLG1P53597 346 aaKnown RBP10.68□□□□□ -0.7
GABPB1-206ENST00000543881 UGT3A2Q3SY77 523 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 KANK2Q63ZY3 851 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 RNF165Q6ZSG1 346 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 EXOC3L1Q86VI1 746 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 UBQLNLQ8IYU4 475 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 CLHC1Q8NHS4 586 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 PPP1R14CQ8TAE6 165 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 ZNF764Q96H86 408 aaPredicted RBP10.68□□□□□ -0.7
GABPB1-206ENST00000543881 TSSK3Q96PN8 268 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 PIGMQ9H3S5 423 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 L2HGDHQ9H9P8 463 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 Q9N2J8 555 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 EQTNQ9NQ60 294 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 FAM120CQ9NX05 1096 aaKnown RBP10.68□□□□□ -0.7
GABPB1-206ENST00000543881 ABCG2Q9UNQ0 655 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 DNAJC15Q9Y5T4 150 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 TLDC2A0PJX2 215 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 OR2M5A3KFT3 312 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 RNF212BA8MTL3 300 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 DEFB108AA8MXU0 73 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 HAX1O00165 279 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 LSM1O15116 133 aaKnown RBP10.68□□□□□ -0.7
GABPB1-206ENST00000543881 RGS14O43566 566 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 TBX19O60806 448 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 TRIM13O60858 407 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 UTS2O95399 124 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 PEPDP12955 493 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 EFNA1P20827 205 aaPredicted RBP10.68□□□□□ -0.7
GABPB1-206ENST00000543881 ALDH3A1P30838 453 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 CPOXP36551 454 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 FRKP42685 505 aaPredicted RBP10.68□□□□□ -0.7
GABPB1-206ENST00000543881 DIO3P55073 304 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 CLDN20P56880 219 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 PDE7AQ13946 482 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 ZNHIT3Q15649 155 aaPredicted RBP10.68□□□□□ -0.7
GABPB1-206ENST00000543881 GRAMD1BQ3KR37 738 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 RAET1LQ5VY80 246 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 VWA1Q6PCB0 445 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 ZAR1Q86SH2 424 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 GALNT10Q86SR1 603 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 BANPQ8N9N5 519 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 FIG4Q92562 907 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 STARD4Q96DR4 205 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 C1GALT1C1Q96EU7 318 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 DTNBP1Q96EV8 351 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 GIMAP5Q96F15 307 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 PIK3IP1Q96FE7 263 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 CCT7Q99832 543 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 MECRQ9BV79 373 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 ACBD3Q9H3P7 528 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 REEP4Q9H6H4 257 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 ANKZF1Q9H8Y5 726 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 SDHAF3Q9NRP4 125 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 MKS1Q9NXB0 559 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 SLC17A7Q9P2U7 560 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 PACSIN3Q9UKS6 424 aa10.68□□□□□ -0.7
GABPB1-206ENST00000543881 HEATR5AQ86XA9 2040 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 IGLV3-32A0A0A0MS00 114 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 SHISA8B8ZZ34 492 aa10.67□□□□□ -0.7
GABPB1-206ENST00000543881 GMFGO60234 142 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms