RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	ADAMTS15	Q8TE58	950 aa		12.85	□□□□□ -0.35
CCHCR1-222	ENST00000507459	DTNBP1	Q96EV8	351 aa		12.85	□□□□□ -0.35
CCHCR1-222	ENST00000507459	SFXN2	Q96NB2	322 aa		12.85	□□□□□ -0.35
CCHCR1-222	ENST00000507459	TRIB1	Q96RU8	372 aa		12.85	□□□□□ -0.35
CCHCR1-222	ENST00000507459	BTBD2	Q9BX70	525 aa		12.85	□□□□□ -0.35
CCHCR1-222	ENST00000507459	ACTRT3	Q9BYD9	372 aa		12.85	□□□□□ -0.35
CCHCR1-222	ENST00000507459	PRDM14	Q9GZV8	571 aa		12.85	□□□□□ -0.35
CCHCR1-222	ENST00000507459		Q9UFV3	132 aa		12.85	□□□□□ -0.35
CCHCR1-222	ENST00000507459	PCDHGB4	Q9UN71	923 aa		12.85	□□□□□ -0.35
CCHCR1-222	ENST00000507459		C9JVG2	144 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	ANKRD28	O15084	1053 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	ZIC3	O60481	467 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	OXSR1	O95747	527 aa	Predicted RBP	12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	COX6B1	P14854	86 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	HPGD	P15428	266 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	HK1	P19367	917 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	CLNS1A	P54105	237 aa	Known RBP	12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	DSCR4	P56555	118 aa	Predicted RBP	12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	UFM1	P61960	85 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	C17orf67	Q0P5P2	114 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	ACSF3	Q4G176	576 aa	Predicted RBP	12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	SLC9B1	Q4ZJI4	515 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	SPANXN4	Q5MJ08	99 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	EXOSC6	Q5RKV6	272 aa	Known RBP	12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	ANXA8L1	Q5VT79	327 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	OGFOD2	Q6N063	350 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	AAGAB	Q6PD74	315 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	ENPP6	Q6UWR7	440 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	SPATA19	Q7Z5L4	167 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	FADS6	Q8N9I5	356 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	GATS	Q8NAP1	163 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	VPS37A	Q8NEZ2	397 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	OR8J2	Q8NGG1	315 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	FAM110B	Q8TC76	370 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	MOAP1	Q96BY2	351 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	STAC	Q99469	402 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	PIGU	Q9H490	435 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	PTGES2	Q9H7Z7	377 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	KCNJ16	Q9NPI9	418 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	DUSP22	Q9NRW4	184 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	AIG1	Q9NVV5	245 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	GPATCH2	Q9NW75	528 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	GIN1	Q9NXP7	522 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	KCNE3	Q9Y6H6	103 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	CRYBG3	Q68DQ2	2970 aa		12.84	□□□□□ -0.35
CCHCR1-222	ENST00000507459	NAV2	Q8IVL1	2488 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	PCNX3	Q9H6A9	2034 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	RNF103-CHMP3	A0A140T963	221 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	PRSS51	A0A1B0GVH4	220 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459		E9PBE3	544 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459		H0Y3Z8	333 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	RNASET2	O00584	256 aa	Known RBP	12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	KLF11	O14901	512 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	NDUFB5	O43674	189 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	EPPIN	O95925	133 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	KRT16	P08779	473 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	H2AFX	P16104	143 aa	Predicted RBP	12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	ATP6V1C1	P21283	382 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	TBXA2R	P21731	343 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	MATN1	P21941	496 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	S100A3	P33764	101 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	CASP9	P55211	416 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	GFRA1	P56159	465 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	RPS26	P62854	115 aa	Known RBP	12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	PHC1	P78364	1004 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	SF3B4	Q15427	424 aa	Known RBP eCLIP	12.83	□□□□□ -0.36	8e-6	■□□□□ 8.7
CCHCR1-222	ENST00000507459	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	FAM174B	Q3ZCQ3	159 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	RIPPLY2	Q5TAB7	128 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	RAET1L	Q5VY80	246 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	BHLHB9	Q6PI77	547 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	SEM1	Q6ZVN7	128 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	C6orf120	Q7Z4R8	191 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	TNIP2	Q8NFZ5	429 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	OR5D16	Q8NGK9	328 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	OR5M1	Q8NGP8	315 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	PIWIL2	Q8TC59	973 aa	Known RBP	12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	LRRC8C	Q8TDW0	803 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	DYDC1	Q8WWB3	177 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	TESC	Q96BS2	214 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	MARK4	Q96L34	752 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	TEX37	Q96LM6	180 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	OR7D2	Q96RA2	312 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	G6PC3	Q9BUM1	346 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	UBQLN4	Q9NRR5	601 aa		12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.83	□□□□□ -0.36
CCHCR1-222	ENST00000507459	PKDREJ	Q9NTG1	2253 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	ARHGAP21	Q5T5U3	1957 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	NPIPA5	A0A0B4J1W7	369 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	ALG1L2	C9J202	215 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	FAM47E-STBD1	D6RA91	191 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	NPIPA7	E9PJI5	369 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	SCD	O00767	359 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	DIAPH2	O60879	1101 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	SCN2B	O60939	215 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	TOX	O94900	526 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	NPIPA8	P0DM63	369 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	RNF144A	P50876	292 aa	Predicted RBP	12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	DGKQ	P52824	942 aa		12.82	□□□□□ -0.36
CCHCR1-222	ENST00000507459	RCAN2	Q14206	197 aa		12.82	□□□□□ -0.36

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