RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 ZCCHC12Q6PEW1 402 aa17.8■□□□□ 0.44
SFXN1-203ENST00000502393 R3HCC1LQ7Z5L2 792 aaKnown RBP17.8■□□□□ 0.44
SFXN1-203ENST00000502393 DDIASQ8IXT1 998 aa17.8■□□□□ 0.44
SFXN1-203ENST00000502393 CLHC1Q8NHS4 586 aa17.8■□□□□ 0.44
SFXN1-203ENST00000502393 TWIST2Q8WVJ9 160 aa17.8■□□□□ 0.44
SFXN1-203ENST00000502393 GIMAP5Q96F15 307 aa17.8■□□□□ 0.44
SFXN1-203ENST00000502393 MS4A4EQ96PG1 132 aa17.8■□□□□ 0.44
SFXN1-203ENST00000502393 FAM111AQ96PZ2 611 aa17.8■□□□□ 0.44
SFXN1-203ENST00000502393 YIPF4Q9BSR8 244 aa17.8■□□□□ 0.44
SFXN1-203ENST00000502393 AP4B1Q9Y6B7 739 aa17.8■□□□□ 0.44
SFXN1-203ENST00000502393 HRNRQ86YZ3 2850 aaPredicted RBP17.8■□□□□ 0.44
SFXN1-203ENST00000502393 TMEM114B3SHH9 223 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 BCKDHAP12694 445 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 PCYT1AP49585 367 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 LRIG3Q6UXM1 1119 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 APOOLQ6UXV4 268 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 CAMKMTQ7Z624 323 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 EXOC3L1Q86VI1 746 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 SLC9A6Q92581 669 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 MBD6Q96DN6 1003 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 STARD4Q96DR4 205 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 SLC17A7Q9P2U7 560 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 NDRG3Q9UGV2 375 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 LGALS13Q9UHV8 139 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 PLEKHA6Q9Y2H5 1048 aa17.79■□□□□ 0.44
SFXN1-203ENST00000502393 MED13LQ71F56 2210 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 SH3D21A4FU49 640 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 TMEM233B4DJY2 109 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 ALG1L2C9J202 215 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 H3BML4 177 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 EMC8O43402 210 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 NGFRP08138 427 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 SERPINB5P36952 375 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 SUCLG1P53597 346 aaKnown RBP17.78■□□□□ 0.44
SFXN1-203ENST00000502393 IFFO1Q0D2I5 559 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 MLC1Q15049 377 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.78■□□□□ 0.44
SFXN1-203ENST00000502393 PAMR1Q6UXH9 720 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 SZRD1Q7Z422 152 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 CNEP1R1Q8N9A8 125 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 OR5M1Q8NGP8 315 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 FAM110BQ8TC76 370 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 PPP3R2Q96LZ3 170 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 ALPK1Q96QP1 1244 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 MECRQ9BV79 373 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 PINK1Q9BXM7 581 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 ROPN1BQ9BZX4 212 aaPredicted RBP17.78■□□□□ 0.44
SFXN1-203ENST00000502393 ROPN1Q9HAT0 212 aaPredicted RBP17.78■□□□□ 0.44
SFXN1-203ENST00000502393 STOML1Q9UBI4 398 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 ZNF175Q9Y473 711 aa17.78■□□□□ 0.44
SFXN1-203ENST00000502393 H0YC42 278 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 PIP5K1BO14986 540 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 SEC14L5O43304 696 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 NDUFB5O43674 189 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 SMNDC1O75940 238 aaKnown RBP eCLIP17.77■□□□□ 0.44
SFXN1-203ENST00000502393 KCNK2O95069 426 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 ACP2P11117 423 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 TBXA2RP21731 343 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 MAPK1P28482 360 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 LCN1P31025 176 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 CPOXP36551 454 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 RPL3P39023 403 aaKnown RBP17.77■□□□□ 0.44
SFXN1-203ENST00000502393 TPD52P55327 224 aaPredicted RBP17.77■□□□□ 0.44
SFXN1-203ENST00000502393 CLDN20P56880 219 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 RPS3AP61247 264 aaKnown RBP17.77■□□□□ 0.44
SFXN1-203ENST00000502393 TMEM44Q2T9K0 475 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 MFSD12Q6NUT3 480 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 METTL25Q8N6Q8 603 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 SLC16A11Q8NCK7 471 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 OR6Y1Q8NGX8 325 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 OR4C3Q8NH37 302 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 TCP10LQ8TDR4 215 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 FIG4Q92562 907 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 TMUB1Q9BVT8 246 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 PLEKHF2Q9H8W4 249 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 RNF122Q9H9V4 155 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 ATP6V1HQ9UI12 483 aa17.77■□□□□ 0.44
SFXN1-203ENST00000502393 MED12LQ86YW9 2145 aa17.77■□□□□ 0.43
SFXN1-203ENST00000502393 A0A087WZY1 265 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 CASKO14936 926 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 SPAG7O75391 227 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 OXSR1O95747 527 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-203ENST00000502393 RAF1P04049 648 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 HRGP04196 525 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 ALOX5P09917 674 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 CD99P14209 185 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 HPCAL1P37235 193 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 KIR2DL2P43627 348 aaPredicted RBP17.76■□□□□ 0.43
SFXN1-203ENST00000502393 SERPINB4P48594 390 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 VSNL1P62760 191 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 FGFBP1Q14512 234 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 PON3Q15166 354 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 DUSP5Q16690 384 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 XKR7Q5GH72 579 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 EXOSC6Q5RKV6 272 aaKnown RBP17.76■□□□□ 0.43
SFXN1-203ENST00000502393 VWA1Q6PCB0 445 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 TGIF2LYQ8IUE0 185 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 SMPDL3BQ92485 455 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 PGM2Q96G03 612 aa17.76■□□□□ 0.43
SFXN1-203ENST00000502393 ZNF469Q96JG9 3925 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms