RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ZPLD1Q8TCW7 415 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 SMPDL3BQ92485 455 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 JADE3Q92613 823 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 HOXB13Q92826 284 aaPredicted RBP9.6□□□□□ -0.87
NELFE-213ENST00000494956 CDS1Q92903 461 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 CHMP6Q96FZ7 201 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 ZNF764Q96H86 408 aaPredicted RBP9.6□□□□□ -0.87
NELFE-213ENST00000494956 MS4A4EQ96PG1 132 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 SORT1Q99523 831 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 LIME1Q9H400 295 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 CXorf36Q9H7Y0 433 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 CALHM2Q9HA72 323 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 KCNK9Q9NPC2 374 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 ACSS1Q9NUB1 689 aaPredicted RBP9.6□□□□□ -0.87
NELFE-213ENST00000494956 ZCCHC3Q9NUD5 404 aaKnown RBP9.6□□□□□ -0.87
NELFE-213ENST00000494956 FAM120CQ9NX05 1096 aaKnown RBP9.6□□□□□ -0.87
NELFE-213ENST00000494956 ZNF337Q9Y3M9 751 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 SNX8Q9Y5X2 465 aa9.6□□□□□ -0.87
NELFE-213ENST00000494956 CSMD2Q7Z408 3487 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 OR2M5A3KFT3 312 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 TMEM114B3SHH9 223 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 H3BML4 177 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 KCNH1O95259 989 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 OXSR1O95747 527 aaPredicted RBP9.59□□□□□ -0.87
NELFE-213ENST00000494956 SERPINE1P05121 402 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 HMGN2P05204 90 aaKnown RBP9.59□□□□□ -0.87
NELFE-213ENST00000494956 DHRS4L1P0CG22 281 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 CTSSP25774 331 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 HPCAL1P37235 193 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 ASCL1P50553 236 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 DIO3P55073 304 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 CASP9P55211 416 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 CLDN20P56880 219 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 ABCE1P61221 599 aaKnown RBP9.59□□□□□ -0.87
NELFE-213ENST00000494956 RPS26P62854 115 aaKnown RBP9.59□□□□□ -0.87
NELFE-213ENST00000494956 LASP1Q14847 261 aaKnown RBP9.59□□□□□ -0.87
NELFE-213ENST00000494956 CD226Q15762 336 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 TNFAIP8L3Q5GJ75 292 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 EXOSC6Q5RKV6 272 aaKnown RBP9.59□□□□□ -0.87
NELFE-213ENST00000494956 OLIG3Q7RTU3 272 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 LUZP2Q86TE4 346 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 CDH24Q86UP0 819 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 GRAMD2AQ8IUY3 354 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 RIMKLAQ8IXN7 391 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 CLECL1Q8IZS7 167 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 ANKRD42Q8N9B4 389 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 CDRT4Q8N9R6 151 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 CEP70Q8NHQ1 597 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 LINC01560Q8TB33 94 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 FAM110BQ8TC76 370 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 FIG4Q92562 907 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 C1GALT1C1Q96EU7 318 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 SH3YL1Q96HL8 342 aaPredicted RBP9.59□□□□□ -0.87
NELFE-213ENST00000494956 ZNF845Q96IR2 970 aaPredicted RBP9.59□□□□□ -0.87
NELFE-213ENST00000494956 GPATCH1Q9BRR8 931 aaKnown RBP9.59□□□□□ -0.87
NELFE-213ENST00000494956 TBL1XR1Q9BZK7 514 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 GIN1Q9NXP7 522 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 NTMQ9P121 344 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 ABCG2Q9UNQ0 655 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 VDAC3Q9Y277 283 aa9.59□□□□□ -0.87
NELFE-213ENST00000494956 MRPS18CQ9Y3D5 142 aaKnown RBP9.59□□□□□ -0.87
NELFE-213ENST00000494956 CSMD1Q96PZ7 3565 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 TACC2O95359 2948 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 FAM47E-STBD1D6RA91 191 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 SYT5O00445 386 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 CFLARO15519 480 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 OIP5O43482 229 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 ZWINTO95229 277 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 IFI6P09912 130 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 ALOX5P09917 674 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 CHMP24386 653 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 MAPK1P28482 360 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 GCKP35557 465 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 SERPINB5P36952 375 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 KIR2DL3P43628 341 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 SLC1A6P48664 564 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 CCT3P49368 545 aaKnown RBP9.58□□□□□ -0.88
NELFE-213ENST00000494956 POU6F2P78424 691 aaPredicted RBP9.58□□□□□ -0.88
NELFE-213ENST00000494956 PRR5P85299 388 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 TP53BP2Q13625 1128 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 PGS1Q32NB8 556 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 NDUFAF6Q330K2 333 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 CPTPQ5TA50 214 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 OR4F3Q6IEY1 312 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 AAGABQ6PD74 315 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 LRIG3Q6UXM1 1119 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 R3HCC1LQ7Z5L2 792 aaKnown RBP9.58□□□□□ -0.88
NELFE-213ENST00000494956 COX18Q8N8Q8 333 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 OR5D16Q8NGK9 328 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 RNASE6Q93091 150 aaKnown RBP9.58□□□□□ -0.88
NELFE-213ENST00000494956 COQ8BQ96D53 544 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 MTERF3Q96E29 417 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 ARSGQ96EG1 525 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 PAIP2Q9BPZ3 127 aaKnown RBP9.58□□□□□ -0.88
NELFE-213ENST00000494956 PINK1Q9BXM7 581 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 AKTIPQ9H8T0 292 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 C3orf14Q9HBI5 128 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 SDHAF3Q9NRP4 125 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 PNPOQ9NVS9 261 aa9.58□□□□□ -0.88
NELFE-213ENST00000494956 ZNF629Q9UEG4 869 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms