RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 FAM47EQ6ZV65 393 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 PRSS42Q7Z5A4 293 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 PARGQ86W56 976 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 ZNF695Q8IW36 515 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 SYCP3Q8IZU3 236 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 ARRDC1Q8N5I2 433 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 CSNK1A1LQ8N752 337 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 ZNF709Q8N972 641 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 OR4A16Q8NH70 328 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 PSMA8Q8TAA3 256 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 TMEM37Q8WXS4 190 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 C18orf25Q96B23 403 aaPredicted RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 DNAJA3Q96EY1 480 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 ZMAT2Q96NC0 199 aaKnown RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 CARD6Q9BX69 1037 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 FAM124BQ9H5Z6 455 aaPredicted RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 COPS7BQ9H9Q2 264 aaPredicted RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 STARD5Q9NSY2 213 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 RBM28Q9NW13 759 aaKnown RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 CD274Q9NZQ7 290 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 AKAP7Q9P0M2 348 aaPredicted RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 MARCOQ9UEW3 520 aaPredicted RBP1.04□□□□□ -2.24
CCDC93-209ENST00000488908 ERVW-1Q9UQF0 538 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 CDH10Q9Y6N8 788 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 PTPRUQ92729 1446 aa1.04□□□□□ -2.24
CCDC93-209ENST00000488908 A0A096LNJ9 63 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 A0A0J9YXY3 114 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 A4D1N5 150 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 ZNF233A6NK53 670 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 E9PLD3 99 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 DCNP07585 359 aaKnown RBP1.03□□□□□ -2.24
CCDC93-209ENST00000488908 IGFBP1P08833 259 aaPredicted RBP1.03□□□□□ -2.24
CCDC93-209ENST00000488908 UROSP10746 265 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 RCC1P18754 421 aaPredicted RBP1.03□□□□□ -2.24
CCDC93-209ENST00000488908 CELP19835 753 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 PTBP1P26599 531 aaKnown RBP eCLIP1.03□□□□□ -2.24
CCDC93-209ENST00000488908 TMOD1P28289 359 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 UGT1A5P35504 534 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 NPY2RP49146 381 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 EMDP50402 254 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 LHX2P50458 406 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 SGSHP51688 502 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 MNAT1P51948 309 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 SSTP61278 116 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 NME3Q13232 169 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 SCARB2Q14108 478 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 KCNJ11Q14654 390 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 CLPPQ16740 277 aaPredicted RBP1.03□□□□□ -2.24
CCDC93-209ENST00000488908 LRRC36Q1X8D7 754 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 EPC2Q52LR7 807 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 CYBRD1Q53TN4 286 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 C5orf47Q569G3 176 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 FAM133BQ5BKY9 247 aaKnown RBP1.03□□□□□ -2.24
CCDC93-209ENST00000488908 KCTD9Q7L273 389 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 CENPSQ8N2Z9 138 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 OR4F17Q8NGA8 305 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 OR2AP1Q8NGE2 309 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 FIBINQ8TAL6 211 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 C7orf33Q8WU49 177 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 P3H4Q92791 437 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 TMEM80Q96HE8 168 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 FAM210BQ96KR6 192 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 OR4F4Q96R69 305 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 ADPGKQ9BRR6 497 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 CACNG6Q9BXT2 260 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 TMEM245Q9H330 911 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 IL1RAPL2Q9NP60 686 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 PNO1Q9NRX1 252 aaKnown RBP1.03□□□□□ -2.24
CCDC93-209ENST00000488908 DCAF13Q9NV06 445 aaKnown RBP1.03□□□□□ -2.24
CCDC93-209ENST00000488908 CNIH4Q9P003 139 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 ONECUT1Q9UBC0 465 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 MIOXQ9UGB7 285 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 DCDC2Q9UHG0 476 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 FBXW2Q9UKT8 454 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 STX8Q9UNK0 236 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 SNX5Q9Y5X3 404 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 FKBP7Q9Y680 259 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 CLCA3PQ9Y6N3 262 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 NID2Q14112 1375 aa1.03□□□□□ -2.24
CCDC93-209ENST00000488908 GPR179Q6PRD1 2367 aa1.03□□□□□ -2.25
CCDC93-209ENST00000488908 IGKV3D-11A0A0A0MRZ8 115 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 A0A0A6YYC8 382 aaPredicted RBP1.02□□□□□ -2.25
CCDC93-209ENST00000488908 SMIM28A0A1B0GU29 152 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 H0Y626 953 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 I3L1I5 382 aaPredicted RBP1.02□□□□□ -2.25
CCDC93-209ENST00000488908 ZNF263O14978 683 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 NME2P1O60361 137 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 SDC3O75056 442 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 CBR3O75828 277 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 SYNGR4O95473 234 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 PGK2P07205 417 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 CD55P08174 381 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 CCNA2P20248 432 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 MARCKSP29966 332 aaPredicted RBP1.02□□□□□ -2.25
CCDC93-209ENST00000488908 MAGEA4P43358 317 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 DHPSP49366 369 aaPredicted RBP1.02□□□□□ -2.25
CCDC93-209ENST00000488908 SMSP52788 366 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 RAG2P55895 527 aa1.02□□□□□ -2.25
CCDC93-209ENST00000488908 RPS6P62753 249 aaKnown RBP1.02□□□□□ -2.25
CCDC93-209ENST00000488908 ACTA1P68133 377 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 219.8 ms