RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 APIPQ96GX9 242 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 TMEM41AQ96HV5 264 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 LCORQ96JN0 433 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF597Q96LX8 424 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF681Q96N22 645 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 PAFAH2Q99487 392 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 TUBA1CQ9BQE3 449 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 PELOQ9BRX2 385 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 QRSL1Q9H0R6 528 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 UBQLN3Q9H347 655 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 ELOVL6Q9H5J4 265 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 CNTD2Q9H8S5 307 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 PFDN4Q9NQP4 134 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 QPCTLQ9NXS2 382 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 AHSPQ9NZD4 102 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 B4GALT7Q9UBV7 327 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF629Q9UEG4 869 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF639Q9UID6 485 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 ST6GALNAC2Q9UJ37 374 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 FBXL2Q9UKC9 423 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 ADAM29Q9UKF5 820 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 RPH3AQ9Y2J0 694 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 C15orf41Q9Y2V0 281 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 PLLPQ9Y342 182 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 TIMM22Q9Y584 194 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 USF3Q68DE3 2245 aa4.26□□□□□ -1.73
GTF3C3-208ENST00000455546 HEATR1Q9H583 2144 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 CELSR1Q9NYQ6 3014 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 A0A1W2PPR1 153 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 GOLGA6L10A6NI86 522 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 CD8B2A6NJW9 211 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 A8MT66 165 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 B4DXG7 233 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 EEF1E1-BLOC1S5C9J1V9 151 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 H0YC42 278 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 MANBAO00462 879 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 EEF1E1O43324 174 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 GMFGO60234 142 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 ZIC3O60481 467 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 CBR3O75828 277 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 SUPT7LO94864 414 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 SEMA3DO95025 777 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 MPIG6BO95866 241 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 OTCP00480 354 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 ATP1B1P05026 303 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 LPLP06858 475 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 IL3P08700 152 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 RPS17P08708 135 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 TMIGD3P0DMS9 266 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 CT45A8P0DMV1 189 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 CT45A9P0DMV2 189 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 CYP4B1P13584 511 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 DRD5P21918 477 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 CTSSP25774 331 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 GCAP28676 217 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 ECHS1P30084 290 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 PPICP45877 212 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 HTR6P50406 440 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 ASCL1P50553 236 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 DGKQP52824 942 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 FOXA1P55317 472 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 TPD52P55327 224 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 ADAM8P78325 824 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 RPP38P78345 283 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 SRSF2Q01130 221 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 HMGCS1Q01581 520 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 PLCXD2Q0VAA5 305 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 FOXD4Q12950 439 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 DAZAP2Q15038 168 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 GGTA1PQ4G0N0 100 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 FLYWCH1Q4VC44 716 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 CT45A2Q5DJT8 189 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 NHSL2Q5HYW2 709 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 TOR2AQ5JU69 321 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 SH2D4BQ5SQS7 431 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 C6orf163Q5TEZ5 329 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 SLC30A6Q6NXT4 461 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 FRMD7Q6ZUT3 714 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 PAGE2Q7Z2X7 111 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 NUP54Q7Z3B4 507 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 CXorf67Q86X51 503 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 TGIF2LYQ8IUE0 185 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 LACC1Q8IV20 430 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 WDR75Q8IWA0 830 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 PM20D2Q8IYS1 436 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 GCNT2Q8N0V5 402 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 MMGT1Q8N4V1 131 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 OR5M1Q8NGP8 315 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 OR9A2Q8NGT5 310 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 OR14L1PQ8NHC6 308 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 METTL6Q8TCB7 284 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 ZNF483Q8TF39 744 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 EFHD2Q96C19 240 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 CTHRC1Q96CG8 243 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 HSPBAP1Q96EW2 488 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 RMND5BQ96G75 393 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 C16orf45Q96MC5 204 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 KCNA7Q96RP8 456 aa4.25□□□□□ -1.73
GTF3C3-208ENST00000455546 ADOQ96SZ5 270 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms