RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 ZNF300Q96RE9 604 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 EPYCQ99645 322 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 CDC6Q99741 560 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 PIP5K1AQ99755 562 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 SLC29A1Q99808 456 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZPBPQ9BS86 351 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 YIPF4Q9BSR8 244 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 LMF2Q9BU23 707 aaKnown RBP3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 G6PC3Q9BUM1 346 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 STRADBQ9C0K7 418 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 POLR2J2Q9GZM3 115 aaKnown RBP3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 GABARAPL1Q9H0R8 117 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 POLR2J3Q9H1A7 115 aaKnown RBP3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 IRF2BPLQ9H1B7 796 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 SERHL2Q9H4I8 314 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 SYNDIG1Q9H7V2 258 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 EQTNQ9NQ60 294 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 FSCN3Q9NQT6 498 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 BATF3Q9NR55 127 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 FBXO8Q9NRD0 319 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 LANCL2Q9NS86 450 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 C14orf105Q9NVL8 296 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 SMPD3Q9NY59 655 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 USE1Q9NZ43 259 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 MAT2BQ9NZL9 334 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 NDUFAF4Q9P032 175 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 TMEM9Q9P0T7 183 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 PRODH2Q9UF12 536 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 SCOCQ9UIL1 159 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 C3orf18Q9UK00 162 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 MRTO4Q9UKD2 239 aaKnown RBP3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 TMCC3Q9ULS5 477 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 CFL2Q9Y281 166 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 SH3GLB1Q9Y371 365 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 SAMHD1Q9Y3Z3 626 aaKnown RBP3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 AP4B1Q9Y6B7 739 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 CLCA3PQ9Y6N3 262 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 GPR179Q6PRD1 2367 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 WDFY4Q6ZS81 3184 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 DSPPQ9NZW4 1301 aa3.69□□□□□ -1.82
HMGB1P37-201ENST00000439613 PCNX2A6NKB5 2137 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 FER1L5A0AVI2 2057 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 IGLV3-12A0A075B6K2 115 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 IGKV3D-11A0A0A0MRZ8 115 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 A0A1W2PS29 197 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 TCRBV16S1A1N1A0A5B0 115 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 LNP1A1A4G5 178 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 C7orf72A4D263 438 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ARRDC5A6NEK1 342 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 AGAP5A6NIR3 686 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR6C76A6NM76 312 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 C17orf105B2RV13 164 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 B4E171 279 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PDLIM1O00151 329 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 TNFRSF11BO00300 401 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PCDH17O14917 1159 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 POLR1CO15160 346 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 HS6ST1O60243 411 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 SUSD5O60279 629 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 UGT2B11O75310 529 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 NKX2-2O95096 273 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 TNFAIP8O95379 198 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OXSR1O95747 527 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OPN1SWP03999 348 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 KLK3P07288 261 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 H1F0P07305 194 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 HEXBP07686 556 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 CHRM4P08173 479 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 RPSAP08865 295 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PABPC4LP0CB38 370 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 THRBP10828 461 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ACP2P11117 423 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ANXA8P13928 327 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ENDOUP21128 410 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 MAOAP21397 527 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 S1PR1P21453 382 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 DRD5P21918 477 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 MYF6P23409 242 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 LCN1P31025 176 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 CCKBRP32239 447 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 GABRA3P34903 492 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 TRHRP34981 398 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PTGER1P34995 402 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 IFNGR2P38484 337 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 CAPGP40121 348 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 MAP3K8P41279 467 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 TSPAN7P41732 249 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PPICP45877 212 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR1D4P47884 311 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 OR1E2P47887 323 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 EMDP50402 254 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 CHN2P52757 468 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 BTG2P78543 158 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 DCDP81605 110 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 VLDLRP98155 873 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 PPP2R2BQ00005 443 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 MC2RQ01718 297 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 CHRNEQ04844 493 aa3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 ZFP36L1Q07352 338 aaKnown RBP3.68□□□□□ -1.82
HMGB1P37-201ENST00000439613 MERTKQ12866 999 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms