RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 ULBP3Q9BZM4 244 aa20.42■□□□□ 0.86
VSX1-205ENST00000429762 C14orf105Q9NVL8 296 aa20.42■□□□□ 0.86
VSX1-205ENST00000429762 TMCC3Q9ULS5 477 aa20.42■□□□□ 0.86
VSX1-205ENST00000429762 LOXL2Q9Y4K0 774 aa20.42■□□□□ 0.86
VSX1-205ENST00000429762 BCKDKO14874 412 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 ALOX12BO75342 701 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 SMNDC1O75940 238 aaKnown RBP eCLIP20.41■□□□□ 0.86
VSX1-205ENST00000429762 PTNP21246 168 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 EPS8Q12929 822 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 ENTPD8Q5MY95 495 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 TTC23Q5W5X9 447 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 MEX3DQ86XN8 651 aaKnown RBP20.41■□□□□ 0.86
VSX1-205ENST00000429762 SLC7A13Q8TCU3 470 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 SPSB2Q99619 263 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 FUZQ9BT04 418 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 LIN28AQ9H9Z2 209 aaKnown RBP20.41■□□□□ 0.86
VSX1-205ENST00000429762 PAPOLBQ9NRJ5 636 aaKnown RBP20.41■□□□□ 0.86
VSX1-205ENST00000429762 VSTM2BA6NLU5 285 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 SMIM18P0DKX4 95 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 ITGAMP11215 1152 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 CBLP22681 906 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 CCKBRP32239 447 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 ZNF136P52737 540 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 EMP2P54851 167 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 EIPR1Q53HC9 387 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 DESI1Q6ICB0 168 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 ZNF770Q6IQ21 691 aaPredicted RBP20.41■□□□□ 0.86
VSX1-205ENST00000429762 PLEKHM3Q6ZWE6 761 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 BPHLQ86WA6 291 aaPredicted RBP20.41■□□□□ 0.86
VSX1-205ENST00000429762 NLGN4XQ8N0W4 816 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 CNOT9Q92600 299 aaKnown RBP20.41■□□□□ 0.86
VSX1-205ENST00000429762 MR1Q95460 341 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 C8orf44Q96CB5 159 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 FBXO8Q9NRD0 319 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 POLE3Q9NRF9 147 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 AASSQ9UDR5 926 aa20.41■□□□□ 0.86
VSX1-205ENST00000429762 CDHR4A6H8M9 788 aa20.4■□□□□ 0.86
VSX1-205ENST00000429762 AP3D1O14617 1153 aa20.4■□□□□ 0.86
VSX1-205ENST00000429762 ELK4P28324 431 aa20.4■□□□□ 0.86
VSX1-205ENST00000429762 SLC5A2P31639 672 aa20.4■□□□□ 0.86
VSX1-205ENST00000429762 RAPSNQ13702 412 aa20.4■□□□□ 0.86
VSX1-205ENST00000429762 NDUFAF6Q330K2 333 aa20.4■□□□□ 0.86
VSX1-205ENST00000429762 TTC33Q6PID6 262 aaPredicted RBP20.4■□□□□ 0.86
VSX1-205ENST00000429762 ADIPOR1Q96A54 375 aa20.4■□□□□ 0.86
VSX1-205ENST00000429762 CMKLR1Q99788 373 aa20.4■□□□□ 0.86
VSX1-205ENST00000429762 CRB3Q9BUF7 120 aa20.4■□□□□ 0.86
VSX1-205ENST00000429762 B3GALT1Q9Y5Z6 326 aa20.4■□□□□ 0.86
VSX1-205ENST00000429762 OR10H3O60404 316 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 RFPL3O75679 317 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 TNFAIP8O95379 198 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 ONECUT2O95948 504 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 THY1P04216 161 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 ANXA8P13928 327 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 AGXTP21549 392 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 HTR2AP28223 471 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 NUBP1P53384 320 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 EBPQ15125 230 aaKnown RBP20.39■□□□□ 0.86
VSX1-205ENST00000429762 C8orf59Q8N0T1 100 aaPredicted RBP20.39■□□□□ 0.86
VSX1-205ENST00000429762 GALNT6Q8NCL4 622 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 OR1N1Q8NGS0 311 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 OR4C3Q8NH37 302 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 DIO2Q92813 273 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 GRIP2Q9C0E4 1043 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 NCDNQ9UBB6 729 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 COPS7AQ9UBW8 275 aa20.39■□□□□ 0.86
VSX1-205ENST00000429762 C2orf92A0A1B0GVN3 265 aa20.39■□□□□ 0.85
VSX1-205ENST00000429762 SH3PXD2BA1X283 911 aa20.39■□□□□ 0.85
VSX1-205ENST00000429762 FAAHO00519 579 aa20.39■□□□□ 0.85
VSX1-205ENST00000429762 PPICP45877 212 aa20.39■□□□□ 0.85
VSX1-205ENST00000429762 NPRL3Q12980 569 aa20.39■□□□□ 0.85
VSX1-205ENST00000429762 CTU2Q2VPK5 515 aaKnown RBP20.39■□□□□ 0.85
VSX1-205ENST00000429762 RNF220Q5VTB9 566 aa20.39■□□□□ 0.85
VSX1-205ENST00000429762 ADAMTS16Q8TE57 1224 aa20.39■□□□□ 0.85
VSX1-205ENST00000429762 LCORQ96JN0 433 aaPredicted RBP20.39■□□□□ 0.85
VSX1-205ENST00000429762 A0A1W2PRQ8 180 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 H3BNH8 94 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 SLC16A6O15403 523 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 CDH2P19022 906 aaPredicted RBP20.38■□□□□ 0.85
VSX1-205ENST00000429762 NR0B1P51843 470 aaKnown RBP20.38■□□□□ 0.85
VSX1-205ENST00000429762 CDH15P55291 814 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 DGCR6Q14129 220 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 MEP1AQ16819 746 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 ZNF691Q5VV52 312 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 MRPL14Q6P1L8 145 aaKnown RBP20.38■□□□□ 0.85
VSX1-205ENST00000429762 GATSQ8NAP1 163 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 METTL21AQ8WXB1 218 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 ART5Q96L15 291 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 G6PC3Q9BUM1 346 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 WWTR1Q9GZV5 400 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 ZNF696Q9H7X3 374 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 ZNF556Q9HAH1 456 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 PISDQ9UG56 409 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 POFUT2Q9Y2G5 429 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 GMPPBQ9Y5P6 360 aa20.38■□□□□ 0.85
VSX1-205ENST00000429762 NPIPB9F8W1W9 429 aa20.37■□□□□ 0.85
VSX1-205ENST00000429762 CYP7B1O75881 506 aa20.37■□□□□ 0.85
VSX1-205ENST00000429762 SOX30O94993 753 aa20.37■□□□□ 0.85
VSX1-205ENST00000429762 SMIM11AP58511 58 aa20.37■□□□□ 0.85
VSX1-205ENST00000429762 PGBD2Q6P3X8 592 aa20.37■□□□□ 0.85
VSX1-205ENST00000429762 KLHL17Q6TDP4 642 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms