RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 CTNNB1P35222 781 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 SERPINB6P35237 376 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 SERPINB5P36952 375 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CAPGP40121 348 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 FRKP42685 505 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 GCLMP48507 274 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 POU3F4P49335 361 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 AQP5P55064 265 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 AQP4P55087 323 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ARPC4P59998 168 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ERVK11-1P61568 191 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 YWHAEP62258 255 aaKnown RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 RELAQ04206 551 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 KDSRQ06136 332 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CYP24A1Q07973 514 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 BST1Q10588 318 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 SPP2Q13103 211 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TSTA3Q13630 321 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TFDP1Q14186 410 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TFDP2Q14188 446 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TRIP10Q15642 601 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TRIP13Q15645 432 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TPSAB1Q15661 275 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 SNRNP35Q16560 246 aaKnown RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 MOGQ16653 247 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 UBE2SQ16763 222 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 DUOXA1Q1HG43 343 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF876PQ49A33 203 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZBED5Q49AG3 693 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 GPAT3Q53EU6 434 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZC2HC1CQ53FD0 456 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 SFT2D3Q587I9 215 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 RAET1GQ6H3X3 334 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 FAM109BQ6ICB4 259 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 NIPAL1Q6NVV3 410 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 WDR88Q6ZMY6 472 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TPRG1Q6ZUI0 275 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TMEM179Q6ZVK1 233 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CAMKMTQ7Z624 323 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ADCK2Q7Z695 626 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 BIVMQ86UB2 503 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ARID3BQ8IVW6 561 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 OFCC1Q8IZS5 231 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 PGAM4Q8N0Y7 254 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 DNAAF3Q8N9W5 541 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 UXS1Q8NBZ7 420 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 LEMD2Q8NC56 503 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TMEM35BQ8NCS4 154 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CCNYQ8ND76 341 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 FBXO36Q8NEA4 188 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 DDHD1Q8NEL9 900 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 BBS1Q8NFJ9 593 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TSPAN14Q8NG11 270 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 RDH11Q8TC12 318 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TAS1R2Q8TE23 839 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CHPT1Q8WUD6 406 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TRUB1Q8WWH5 349 aaKnown RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TMEM190Q8WZ59 177 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 POP5Q969H6 163 aaKnown RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 PTERQ96BW5 349 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 DTD2Q96FN9 168 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 DCUN1D1Q96GG9 259 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 PGAM5Q96HS1 289 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF354BQ96LW1 612 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ZNF560Q96MR9 790 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 RILPQ96NA2 401 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CCT7Q99832 543 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 C1orf50Q9BV19 199 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 NUSAP1Q9BXS6 441 aaKnown RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 MRPL1Q9BYD6 325 aaKnown RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ANKRD60Q9BZ19 345 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 EGLN1Q9GZT9 426 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 LHX5Q9H2C1 402 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 C10orf88Q9H8K7 445 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 TREM1Q9NP99 234 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 FBXO6Q9NRD1 293 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 PNPLA3Q9NST1 481 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 PRMT7Q9NVM4 692 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 GDE1Q9NZC3 331 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 EMC3Q9P0I2 261 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 RCC2Q9P258 522 aaKnown RBP3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 SLC17A7Q9P2U7 560 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CD300AQ9UGN4 299 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 HMGXB4Q9UGU5 601 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ADAM28Q9UKQ2 775 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 CHMP2BQ9UQN3 213 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ERVK-19Q9WJR5 959 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 STYXL1Q9Y6J8 313 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 ARFGEF1Q9Y6D6 1849 aa3.34□□□□□ -1.87
HMGB3P23-201ENST00000414981 COL14A1Q05707 1796 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 A0A075B6Q4 140 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 TCRBV9S1A1TA0A576 114 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 MEX3AA1L020 520 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 BCLAF3A2AJT9 711 aaKnown RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAM159BA6NKW6 160 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 H3BNH8 94 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 H3BQ06 376 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 LRRTM2O43300 516 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 SNAP91O60641 907 aa3.33□□□□□ -1.88
HMGB3P23-201ENST00000414981 SCGB2A1O75556 95 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms