RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 DDX5P17844 614 aaKnown RBP16.03■□□□□ 0.16
LSM5-204ENST00000409909 PRPS1L1P21108 318 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 RPL3P39023 403 aaKnown RBP16.03■□□□□ 0.16
LSM5-204ENST00000409909 AGFG1P52594 562 aaKnown RBP16.03■□□□□ 0.16
LSM5-204ENST00000409909 DIO3P55073 304 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 PRR5P85299 388 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 SNTB1Q13884 538 aaKnown RBP16.03■□□□□ 0.16
LSM5-204ENST00000409909 RCAN2Q14206 197 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 FIGNL1Q6PIW4 674 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 PSMA8Q8TAA3 256 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 OR5P2Q8WZ92 322 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 CXorf36Q9H7Y0 433 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 MCCC2Q9HCC0 563 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 ZCCHC3Q9NUD5 404 aaKnown RBP16.03■□□□□ 0.16
LSM5-204ENST00000409909 ASIC5Q9NY37 505 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 EIF3LQ9Y262 564 aaKnown RBP16.03■□□□□ 0.16
LSM5-204ENST00000409909 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.03■□□□□ 0.16
LSM5-204ENST00000409909 L3MBTL1Q9Y468 752 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 SNX8Q9Y5X2 465 aa16.03■□□□□ 0.16
LSM5-204ENST00000409909 HRNRQ86YZ3 2850 aaPredicted RBP16.03■□□□□ 0.16
LSM5-204ENST00000409909 IGLV3-32A0A0A0MS00 114 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 CLCA1A8K7I4 914 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 ANGPTL1O95841 491 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 C6orf47O95873 294 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 HMGN2P05204 90 aaKnown RBP16.02■□□□□ 0.16
LSM5-204ENST00000409909 ALOX5P09917 674 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 MYZAPP0CAP1 466 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 HK1P19367 917 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 CLK3P49761 638 aaKnown RBP16.02■□□□□ 0.16
LSM5-204ENST00000409909 RPL14P50914 215 aaKnown RBP16.02■□□□□ 0.16
LSM5-204ENST00000409909 C21orf58P58505 322 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 ZCCHC12Q6PEW1 402 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 ARSKQ6UWY0 536 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 CROCCP2Q86T23 111 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 MED12LQ86YW9 2145 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 OR5M1Q8NGP8 315 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 C1GALT1C1Q96EU7 318 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 DTNBP1Q96EV8 351 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 UCN2Q96RP3 112 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 SH3GL2Q99962 352 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 TBL1XR1Q9BZK7 514 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 ATAD3AQ9NVI7 634 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 HAO1Q9UJM8 370 aa16.02■□□□□ 0.16
LSM5-204ENST00000409909 OXSR1O95747 527 aaPredicted RBP16.01■□□□□ 0.15
LSM5-204ENST00000409909 NGFRP08138 427 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 TBXA2RP21731 343 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 CTSSP25774 331 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 CCT3P49368 545 aaKnown RBP16.01■□□□□ 0.15
LSM5-204ENST00000409909 CLDN15P56746 228 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 CLDN8P56748 225 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 WDR4P57081 412 aaKnown RBP16.01■□□□□ 0.15
LSM5-204ENST00000409909 C17orf67Q0P5P2 114 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 FOXF2Q12947 444 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 MAD2L1Q13257 205 aaPredicted RBP16.01■□□□□ 0.15
LSM5-204ENST00000409909 STX3Q13277 289 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 LASP1Q14847 261 aaKnown RBP16.01■□□□□ 0.15
LSM5-204ENST00000409909 BCL2A1Q16548 175 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.01■□□□□ 0.15
LSM5-204ENST00000409909 SMU1Q2TAY7 513 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 FBXL19-AS1Q494R0 122 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 CCNJQ5T5M9 372 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 CDS1Q92903 461 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 PRPF18Q99633 342 aaKnown RBP16.01■□□□□ 0.15
LSM5-204ENST00000409909 PAIP2Q9BPZ3 127 aaKnown RBP16.01■□□□□ 0.15
LSM5-204ENST00000409909 DUSP26Q9BV47 211 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 BHLHE41Q9C0J9 482 aaPredicted RBP16.01■□□□□ 0.15
LSM5-204ENST00000409909 PNPOQ9NVS9 261 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 GPATCH2Q9NW75 528 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 NOP53Q9NZM5 478 aaKnown RBP16.01■□□□□ 0.15
LSM5-204ENST00000409909 CLCF1Q9UBD9 225 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 KCNN3Q9UGI6 736 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 ZNF337Q9Y3M9 751 aa16.01■□□□□ 0.15
LSM5-204ENST00000409909 OR2M5A3KFT3 312 aa16■□□□□ 0.15
LSM5-204ENST00000409909 ENO4A6NNW6 628 aa16■□□□□ 0.15
LSM5-204ENST00000409909 ALG1L2C9J202 215 aa16■□□□□ 0.15
LSM5-204ENST00000409909 H0YC42 278 aa16■□□□□ 0.15
LSM5-204ENST00000409909 GMFGO60234 142 aa16■□□□□ 0.15
LSM5-204ENST00000409909 SNUPNO95149 360 aaKnown RBP16■□□□□ 0.15
LSM5-204ENST00000409909 UQCRC1P31930 480 aa16■□□□□ 0.15
LSM5-204ENST00000409909 PRIM2P49643 509 aa16■□□□□ 0.15
LSM5-204ENST00000409909 ASCL1P50553 236 aa16■□□□□ 0.15
LSM5-204ENST00000409909 DGKQP52824 942 aa16■□□□□ 0.15
LSM5-204ENST00000409909 TPD52P55327 224 aaPredicted RBP16■□□□□ 0.15
LSM5-204ENST00000409909 BST1Q10588 318 aa16■□□□□ 0.15
LSM5-204ENST00000409909 GANABQ14697 944 aaKnown RBP16■□□□□ 0.15
LSM5-204ENST00000409909 PGS1Q32NB8 556 aa16■□□□□ 0.15
LSM5-204ENST00000409909 LSM12Q3MHD2 195 aaKnown RBP16■□□□□ 0.15
LSM5-204ENST00000409909 RAET1LQ5VY80 246 aa16■□□□□ 0.15
LSM5-204ENST00000409909 CAMKMTQ7Z624 323 aa16■□□□□ 0.15
LSM5-204ENST00000409909 NATD1Q8N6N6 113 aa16■□□□□ 0.15
LSM5-204ENST00000409909 COX18Q8N8Q8 333 aa16■□□□□ 0.15
LSM5-204ENST00000409909 ANKRD42Q8N9B4 389 aa16■□□□□ 0.15
LSM5-204ENST00000409909 JADE3Q92613 823 aa16■□□□□ 0.15
LSM5-204ENST00000409909 WNT2BQ93097 391 aa16■□□□□ 0.15
LSM5-204ENST00000409909 STACQ99469 402 aa16■□□□□ 0.15
LSM5-204ENST00000409909 TM9SF2Q99805 663 aa16■□□□□ 0.15
LSM5-204ENST00000409909 ZNF559Q9BR84 538 aa16■□□□□ 0.15
LSM5-204ENST00000409909 BTBD2Q9BX70 525 aa16■□□□□ 0.15
LSM5-204ENST00000409909 PIGUQ9H490 435 aa16■□□□□ 0.15
LSM5-204ENST00000409909 PTGES2Q9H7Z7 377 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms