RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 CCL16O15467 120 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 ZNF821O75541 412 aaPredicted RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 CBX7O95931 251 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 EIF4EP06730 217 aaKnown RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 POLR2CP19387 275 aaPredicted RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 IDSP22304 550 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 GMFBP60983 142 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 SORDQ00796 357 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 SYT14P1Q58G82 188 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 MLIPQ5VWP3 458 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 FAM171BQ6P995 826 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 APOOLQ6UXV4 268 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 TMPRSS12Q86WS5 348 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 CRIPAKQ8N1N5 446 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 HDDC3Q8N4P3 179 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 TEX26Q8N6G2 289 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 ZNF454Q8N9F8 522 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 TSEN15Q8WW01 171 aaKnown RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 LRIG1Q96JA1 1093 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 TREX2Q9BQ50 279 aaPredicted RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 PDCD1LG2Q9BQ51 273 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 ADAT1Q9BUB4 502 aaKnown RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.29□□□□□ -1.085e-12■■□□□ 11.4
RTN4-206ENST00000394611 FOLH1BQ9HBA9 442 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 SDHAF2Q9NX18 166 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 MRTO4Q9UKD2 239 aaKnown RBP8.29□□□□□ -1.08
RTN4-206ENST00000394611 PTPRSQ13332 1948 aa8.29□□□□□ -1.08
RTN4-206ENST00000394611 UNC13CQ8NB66 2214 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 RAB19A4D1S5 217 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 ZNF879B4DU55 563 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 LRRN3E7EW58 273 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 PRKNO60260 465 aaPredicted RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 MMP20O60882 483 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 EOMESO95936 686 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 ADRA2AP08913 450 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 CLUP10909 449 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 ACP5P13686 325 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 GLULP15104 373 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 PVALBP20472 110 aaPredicted RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 SLC11A1P49279 550 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 LMAN2Q12907 356 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 KCNAB1Q14722 419 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 EIF4HQ15056 248 aaKnown RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 SF3A2Q15428 464 aaKnown RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 SHHQ15465 462 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 CLVS2Q5SYC1 327 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 ZBTB37Q5TC79 503 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 DGLUCYQ7Z3D6 616 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 DNAAF1Q8NEP3 725 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 OR52N2Q8NGI0 321 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 UCN3Q969E3 161 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 C4orf36Q96KX1 117 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 ZNF582Q96NG8 517 aaPredicted RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 NDC1Q9BTX1 674 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 LRRN3Q9H3W5 708 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 FN3KQ9H479 309 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TRIM36Q9NQ86 728 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 DIABLOQ9NR28 239 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 P2RX2Q9UBL9 471 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 CYB5R1Q9UHQ9 305 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 PCDHB8Q9UN66 801 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 HRH3Q9Y5N1 445 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TBC1D3DA0A087WVF3 549 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TBC1D3IA0A087WXS9 549 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TBC1D3EA0A087X179 549 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TBC1D3KA0A087X1G2 549 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 A0A1B0GW55 424 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TBC1D3BA6NDS4 549 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TBC1D3FA6NER0 549 aaPredicted RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 ANXA2P2A6NMY6 339 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TBC1D3LB9A6J9 549 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 F5H0A9 414 aaPredicted RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 NDUFS4O43181 175 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 ZNF432O94892 652 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 ANXA2P07355 339 aaKnown RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 TBC1D3HP0C7X1 549 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 DUX4L2P0CJ85 424 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 DUX4L3P0CJ86 424 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 DUX4L4P0CJ87 422 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 DUX4L5P0CJ88 424 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 DUX4L6P0CJ89 424 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 DUX4L7P0CJ90 424 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 ELAVL4P26378 380 aaKnown RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 ACADLP28330 430 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 PKLRP30613 574 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 MAPK9P45984 424 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 AANATQ16613 207 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 SLC25A35Q3KQZ1 300 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 PRAMEF14Q5SWL7 426 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 PRAMEF13Q5VWM6 474 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TBC1D3GQ6DHY5 549 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 OR5M10Q6IEU7 315 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TBC1D3CQ6IPX1 549 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 FAM122CQ6P4D5 195 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 PSRC1Q6PGN9 363 aaPredicted RBP8.28□□□□□ -1.08
RTN4-206ENST00000394611 TEX261Q6UWH6 196 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 UNQ6126/PRO20091Q6UXV3 157 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 LIMS2Q7Z4I7 341 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 PRSS58Q8IYP2 241 aa8.28□□□□□ -1.08
RTN4-206ENST00000394611 TBC1D3Q8IZP1 549 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms