RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 YIPF4Q9BSR8 244 aa15.4■□□□□ 0.06
BRCC3-202ENST00000340647 LIME1Q9H400 295 aa15.4■□□□□ 0.06
BRCC3-202ENST00000340647 EML4Q9HC35 981 aaKnown RBP15.4■□□□□ 0.06
BRCC3-202ENST00000340647 DKKL1Q9UK85 242 aa15.4■□□□□ 0.06
BRCC3-202ENST00000340647 PRRC2AP48634 2157 aaKnown RBP15.39■□□□□ 0.05
BRCC3-202ENST00000340647 OR2M5A3KFT3 312 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 WDR91A4D1P6 747 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 H0Y3Z8 333 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 EMC8O43402 210 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 ANGPTL1O95841 491 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 TMIGD3P0DMS9 266 aaPredicted RBP15.39■□□□□ 0.05
BRCC3-202ENST00000340647 GPC1P35052 558 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 ASMTP46597 345 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 DIO3P55073 304 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 CLDN20P56880 219 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 MYBPHQ13203 477 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 BCL2A1Q16548 175 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 FIGNL1Q6PIW4 674 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 ZNF781Q8N8C0 355 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 CDRT4Q8N9R6 151 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 OR4K17Q8NGC6 315 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 GPR151Q8TDV0 419 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 WNT2BQ93097 391 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 MS4A4EQ96PG1 132 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 CXorf36Q9H7Y0 433 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 KCNE3Q9Y6H6 103 aa15.39■□□□□ 0.05
BRCC3-202ENST00000340647 TTC36A6NLP5 189 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 ALG1L2C9J202 215 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 OXSR1O95747 527 aaPredicted RBP15.38■□□□□ 0.05
BRCC3-202ENST00000340647 HMGN2P05204 90 aaKnown RBP15.38■□□□□ 0.05
BRCC3-202ENST00000340647 HK1P19367 917 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 PSMA4P25789 261 aaKnown RBP15.38■□□□□ 0.05
BRCC3-202ENST00000340647 KIR2DL3P43628 341 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 RCAN2Q14206 197 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 SF3B4Q15427 424 aaKnown RBP eCLIP15.38■□□□□ 0.056e-9■■■■■ 44.4
BRCC3-202ENST00000340647 ZNHIT3Q15649 155 aaPredicted RBP15.38■□□□□ 0.05
BRCC3-202ENST00000340647 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.38■□□□□ 0.05
BRCC3-202ENST00000340647 KRT71Q3SY84 523 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 CCNJQ5T5M9 372 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 AAGABQ6PD74 315 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 GCNT2Q8N0V5 402 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 CEP70Q8NHQ1 597 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 FIG4Q92562 907 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 SLC9A6Q92581 669 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 ZNF524Q96C55 264 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 INTS12Q96CB8 462 aaKnown RBP15.38■□□□□ 0.05
BRCC3-202ENST00000340647 ZIM3Q96PE6 472 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 GPATCH2Q9NW75 528 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 PRR14LQ5THK1 2151 aa15.38■□□□□ 0.05
BRCC3-202ENST00000340647 CTIFO43310 598 aaKnown RBP15.37■□□□□ 0.05
BRCC3-202ENST00000340647 NGFRP08138 427 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 G6PDP11413 515 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 TBXA2RP21731 343 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 OPRM1P35372 400 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 DGKQP52824 942 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 C21orf58P58505 322 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 CD226Q15762 336 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 CHI3L2Q15782 390 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 ATP6AP1LQ52LC2 224 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 LRIG3Q6UXM1 1119 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 SPNS3Q6ZMD2 512 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 R3HCC1LQ7Z5L2 792 aaKnown RBP15.37■□□□□ 0.05
BRCC3-202ENST00000340647 GGNQ86UU5 652 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 NUDCD3Q8IVD9 361 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 ZFP28Q8NHY6 868 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 LINC01560Q8TB33 94 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 ZNF845Q96IR2 970 aaPredicted RBP15.37■□□□□ 0.05
BRCC3-202ENST00000340647 GPATCH1Q9BRR8 931 aaKnown RBP15.37■□□□□ 0.05
BRCC3-202ENST00000340647 SERHL2Q9H4I8 314 aa15.37■□□□□ 0.05
BRCC3-202ENST00000340647 SSU72Q9NP77 194 aaKnown RBP15.37■□□□□ 0.05
BRCC3-202ENST00000340647 A0A1W2PPR1 153 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 A0A1W2PRB8 838 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 TMEM114B3SHH9 223 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 ANKRD28O15084 1053 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 OIP5O43482 229 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 GMFGO60234 142 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 SCN2BO60939 215 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 KCNH1O95259 989 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 C6orf47O95873 294 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 PEPDP12955 493 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 DNAJA1P31689 397 aaKnown RBP15.36■□□□□ 0.05
BRCC3-202ENST00000340647 PHC1P78364 1004 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 EMX2Q04743 252 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 C17orf67Q0P5P2 114 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 GANABQ14697 944 aaKnown RBP15.36■□□□□ 0.05
BRCC3-202ENST00000340647 LASP1Q14847 261 aaKnown RBP15.36■□□□□ 0.05
BRCC3-202ENST00000340647 DAZAP2Q15038 168 aaPredicted RBP15.36■□□□□ 0.05
BRCC3-202ENST00000340647 GUSBP1Q15486 140 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 FLYWCH1Q4VC44 716 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 ZCCHC12Q6PEW1 402 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 TMEM200AQ86VY9 491 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 UBQLNLQ8IYU4 475 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 GATSQ8NAP1 163 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 FNDC5Q8NAU1 212 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 POC1BQ8TC44 478 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 OR5P2Q8WZ92 322 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 CDS1Q92903 461 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 STARD4Q96DR4 205 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 TM9SF2Q99805 663 aa15.36■□□□□ 0.05
BRCC3-202ENST00000340647 SFXN3Q9BWM7 321 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms