RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 ZCCHC12Q6PEW1 402 aa16.5■□□□□ 0.23
TMEM88-201ENST00000301599 EXOC3L1Q86VI1 746 aa16.5■□□□□ 0.23
TMEM88-201ENST00000301599 PIK3R3Q92569 461 aa16.5■□□□□ 0.23
TMEM88-201ENST00000301599 SLC9A6Q92581 669 aa16.5■□□□□ 0.23
TMEM88-201ENST00000301599 HOXB13Q92826 284 aaPredicted RBP16.5■□□□□ 0.23
TMEM88-201ENST00000301599 RMND5BQ96G75 393 aaPredicted RBP16.5■□□□□ 0.23
TMEM88-201ENST00000301599 GPATCH1Q9BRR8 931 aaKnown RBP16.5■□□□□ 0.23
TMEM88-201ENST00000301599 RBM24Q9BX46 236 aaKnown RBP16.5■□□□□ 0.23
TMEM88-201ENST00000301599 RTN4RQ9BZR6 473 aa16.5■□□□□ 0.23
TMEM88-201ENST00000301599 CLEC4MQ9H2X3 399 aaPredicted RBP16.5■□□□□ 0.23
TMEM88-201ENST00000301599 ZNF337Q9Y3M9 751 aa16.5■□□□□ 0.23
TMEM88-201ENST00000301599 HCRTR2O43614 444 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 PEX11AO75192 247 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 ANGPTL1O95841 491 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 CRHP06850 196 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 CD1EP15812 388 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 RPL3P39023 403 aaKnown RBP16.49■□□□□ 0.23
TMEM88-201ENST00000301599 DIO3P55073 304 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 MLC1Q15049 377 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 GRAMD1BQ3KR37 738 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 OR2A2Q6IF42 318 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 ZCCHC23Q6ZST2 131 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 P4HA3Q7Z4N8 544 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 OR6Y1Q8NGX8 325 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 TEP1Q99973 2627 aaKnown RBP16.49■□□□□ 0.23
TMEM88-201ENST00000301599 PIGQQ9BRB3 760 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 TMEM109Q9BVC6 243 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.49■□□□□ 0.23
TMEM88-201ENST00000301599 ATP6V1HQ9UI12 483 aa16.49■□□□□ 0.23
TMEM88-201ENST00000301599 KIAA1549Q9HCM3 1950 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 IGLV3-32A0A0A0MS00 114 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 OR2M5A3KFT3 312 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 TNFRSF21O75509 655 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 TGM6O95932 706 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 IGKV1D-16P01601 117 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 BPGMP07738 259 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 ALOX5P09917 674 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 LCN1P31025 176 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 HPCAL1P37235 193 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 CPA2P48052 419 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 ART1P52961 327 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 ATP6AP1LQ52LC2 224 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 PLXDC2Q6UX71 529 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 APOOLQ6UXV4 268 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 SZRD1Q7Z422 152 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 LUZP2Q86TE4 346 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 UBQLNLQ8IYU4 475 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 NATD1Q8N6N6 113 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 SLC16A11Q8NCK7 471 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 LINC01560Q8TB33 94 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 FAM110BQ8TC76 370 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 AGR3Q8TD06 166 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 NRGNQ92686 78 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 NINJ1Q92982 152 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 C1GALT1C1Q96EU7 318 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 GIMAP5Q96F15 307 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 MS4A4EQ96PG1 132 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 STOML1Q9UBI4 398 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 ZDHHC2Q9UIJ5 367 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 DOCK7Q96N67 2140 aa16.48■□□□□ 0.23
TMEM88-201ENST00000301599 ANKHD1Q8IWZ3 2542 aaKnown RBP16.47■□□□□ 0.23
TMEM88-201ENST00000301599 A0A1W2PRB8 838 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 SLC22A20A6NK97 555 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 A8MXE2 369 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 ALG1L2C9J202 215 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 LYPLA1O75608 230 aaPredicted RBP16.47■□□□□ 0.23
TMEM88-201ENST00000301599 NGFRP08138 427 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 TBXA2RP21731 343 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 SERPINB4P48594 390 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 PRIM2P49643 509 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 IST1P53990 364 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 XKR7Q5GH72 579 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 C6orf136Q5SQH8 315 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 MFSD12Q6NUT3 480 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 CDC20BQ86Y33 519 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 NUDCD3Q8IVD9 361 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 GCNT2Q8N0V5 402 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 ARFGAP2Q8N6H7 521 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 OR4C3Q8NH37 302 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 C16orf58Q96GQ5 468 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 PRPF18Q99633 342 aaKnown RBP16.47■□□□□ 0.23
TMEM88-201ENST00000301599 PACSIN3Q9UKS6 424 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 AP4B1Q9Y6B7 739 aa16.47■□□□□ 0.23
TMEM88-201ENST00000301599 F8P00451 2351 aa16.46■□□□□ 0.23
TMEM88-201ENST00000301599 SCAMP2O15127 329 aaKnown RBP16.46■□□□□ 0.23
TMEM88-201ENST00000301599 NDUFB5O43674 189 aa16.46■□□□□ 0.23
TMEM88-201ENST00000301599 TYROBPO43914 113 aa16.46■□□□□ 0.23
TMEM88-201ENST00000301599 SOX30O94993 753 aa16.46■□□□□ 0.23
TMEM88-201ENST00000301599 KCNK2O95069 426 aa16.46■□□□□ 0.23
TMEM88-201ENST00000301599 HSPA4LO95757 839 aa16.46■□□□□ 0.23
TMEM88-201ENST00000301599 ACP2P11117 423 aa16.46■□□□□ 0.23
TMEM88-201ENST00000301599 CREB1P16220 341 aa16.46■□□□□ 0.23
TMEM88-201ENST00000301599 EFNA1P20827 205 aaPredicted RBP16.46■□□□□ 0.23
TMEM88-201ENST00000301599 SUCLG1P53597 346 aaKnown RBP16.46■□□□□ 0.23
TMEM88-201ENST00000301599 CLDN15P56746 228 aa16.46■□□□□ 0.23
TMEM88-201ENST00000301599 RPS3AP61247 264 aaKnown RBP16.46■□□□□ 0.23
TMEM88-201ENST00000301599 DUSP5Q16690 384 aa16.46■□□□□ 0.23
TMEM88-201ENST00000301599 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.46■□□□□ 0.23
TMEM88-201ENST00000301599 LSM12Q3MHD2 195 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms