RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 OR4C15Q8NGM1 316 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 SLC22A8Q8TCC7 542 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 HRASLS5Q96KN8 279 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 TRPV4Q9HBA0 871 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 TMEM165Q9HC07 324 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 ANKRD31Q8N7Z5 1873 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 CXorf51AA0A1B0GTR3 108 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 TNFRSF17Q02223 184 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 CCINQ13939 588 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 AKAP1Q92667 903 aaKnown RBP eCLIP15.72■□□□□ 0.116e-21■□□□□ 9.5
PHRF1-201ENST00000264555 CPNE2Q96FN4 548 aaPredicted RBP15.72■□□□□ 0.11
PHRF1-201ENST00000264555 MEMO1Q9Y316 297 aa15.72■□□□□ 0.11
PHRF1-201ENST00000264555 TAF1LQ8IZX4 1826 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 TRAV6A0A075B6T7 132 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 NPIPA5A0A0B4J1W7 369 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 NPIPA7E9PJI5 369 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 H0YGG7 62 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 IFNA7P01567 189 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 NPIPA8P0DM63 369 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 EN2P19622 333 aaPredicted RBP15.71■□□□□ 0.11
PHRF1-201ENST00000264555 GRPRP30550 384 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 ARF3P61204 181 aaPredicted RBP15.71■□□□□ 0.11
PHRF1-201ENST00000264555 SWI5Q1ZZU3 235 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 TMEM240Q5SV17 173 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 TMEM69Q5SWH9 247 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 DNAJC22Q8N4W6 341 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 DRAXINQ8NBI3 349 aaPredicted RBP15.71■□□□□ 0.11
PHRF1-201ENST00000264555 CD6P30203 668 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 CA5AP35218 305 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 SLC6A8P48029 635 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 PRAMEF17Q5VTA0 474 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 ZNF613Q6PF04 617 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 SLC35A3Q9Y2D2 325 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 VSTM2BA6NLU5 285 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 UPK1BO75841 260 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 TSPAN12O95859 305 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 PLGP00747 810 aaPredicted RBP15.71■□□□□ 0.11
PHRF1-201ENST00000264555 CSTBP04080 98 aaKnown RBP15.71■□□□□ 0.11
PHRF1-201ENST00000264555 PGAM2P15259 253 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 UGT2B7P16662 529 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 FUT1P19526 365 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 CSNK1G2P78368 415 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 ADARB1P78563 741 aaKnown RBP15.71■□□□□ 0.11
PHRF1-201ENST00000264555 PLGLB1Q02325 96 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 CHRNEQ04844 493 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 CHAF1BQ13112 559 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 EXOSC7Q15024 291 aaKnown RBP15.71■□□□□ 0.11
PHRF1-201ENST00000264555 ZC3H14Q6PJT7 736 aaKnown RBP15.71■□□□□ 0.11
PHRF1-201ENST00000264555 CD300LGQ6UXG3 332 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 LNX2Q8N448 690 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 TMEM151AQ8N4L1 468 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 HHIPQ96QV1 700 aa15.71■□□□□ 0.11
PHRF1-201ENST00000264555 C5orf51A6NDU8 294 aa15.71■□□□□ 0.1
PHRF1-201ENST00000264555 AGAP5A6NIR3 686 aa15.71■□□□□ 0.1
PHRF1-201ENST00000264555 C1QAP02745 245 aa15.71■□□□□ 0.1
PHRF1-201ENST00000264555 ITGA5P08648 1049 aa15.71■□□□□ 0.1
PHRF1-201ENST00000264555 ANKRD54Q6NXT1 300 aa15.71■□□□□ 0.1
PHRF1-201ENST00000264555 ULK3Q6PHR2 472 aa15.71■□□□□ 0.1
PHRF1-201ENST00000264555 Q6ZPB1 254 aaPredicted RBP15.71■□□□□ 0.1
PHRF1-201ENST00000264555 TMPRSS12Q86WS5 348 aa15.71■□□□□ 0.1
PHRF1-201ENST00000264555 OR13F1Q8NGS4 319 aa15.71■□□□□ 0.1
PHRF1-201ENST00000264555 TMEM168Q9H0V1 697 aa15.71■□□□□ 0.1
PHRF1-201ENST00000264555 NT5DC2Q9H857 520 aa15.71■□□□□ 0.1
PHRF1-201ENST00000264555 SCP2D1Q9UJQ7 156 aa15.71■□□□□ 0.1
PHRF1-201ENST00000264555 K7ESM1 405 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 GSTT2P0CG29 244 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 RBM34P42696 430 aaKnown RBP15.7■□□□□ 0.1
PHRF1-201ENST00000264555 SPCS2Q15005 226 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 CCNJQ5T5M9 372 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 CCSAPQ6IQ19 270 aaPredicted RBP15.7■□□□□ 0.1
PHRF1-201ENST00000264555 MEX3DQ86XN8 651 aaKnown RBP15.7■□□□□ 0.1
PHRF1-201ENST00000264555 ZNF431Q8TF32 576 aaPredicted RBP15.7■□□□□ 0.1
PHRF1-201ENST00000264555 DNAJA3Q96EY1 480 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 LPAR4Q99677 370 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 ABCG5Q9H222 651 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 THSD1Q9NS62 852 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 ERVK-19Q9WJR5 959 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 RBBP9O75884 186 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 XCR1P46094 333 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 RIDAP52758 137 aaKnown RBP15.7■□□□□ 0.1
PHRF1-201ENST00000264555 TSPAN31Q12999 210 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 DEFB133Q30KQ1 61 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 KIAA0895LQ68EN5 471 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 SYT14Q8NB59 555 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 CYB561A3Q8NBI2 242 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 FAM174AQ8TBP5 190 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 OR4K3Q96R72 315 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 NAA50Q9GZZ1 169 aaKnown RBP15.7■□□□□ 0.1
PHRF1-201ENST00000264555 TM7SF3Q9NS93 570 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 KCMF1Q9P0J7 381 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 HBQ1P09105 142 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 TSFMP43897 325 aaKnown RBP15.7■□□□□ 0.1
PHRF1-201ENST00000264555 NUDT8Q8WV74 236 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 AMDHD1Q96NU7 426 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 MYADMQ96S97 322 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 OR52D1Q9H346 318 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 ZNF208O43345 1280 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 MYOGP15173 224 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 ACY1Q03154 408 aa15.7■□□□□ 0.1
PHRF1-201ENST00000264555 PGGHGQ32M88 737 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms