RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Scgb1a1Q06318 96 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc39a12Q5FWH7 689 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Avl9Q80U56 649 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Mgat4bQ812F8 548 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Zbtb20Q8K0L9 741 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr617Q8VGA1 318 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr807Q8VGI9 311 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Spcs2Q9CYN2 226 aaKnown RBP14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Neurl2Q9D0S4 285 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Sult1c2Q9D939 296 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc38a3Q9DCP2 505 aa14.72□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm8973D3YX71 104 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn2r101E9PZS9 857 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Psmb5O55234 264 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gdf7P43029 461 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ccbe1Q3MI99 408 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Xlr4cQ3TKR2 215 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Psmf1Q8BHL8 271 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Derl2Q8BNI4 239 aaKnown RBP14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 IlvblQ8BU33 632 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 AcppQ8CE08 381 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr441Q8VFS5 310 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr1Q8VGI1 314 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Marc2Q922Q1 338 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Lrrc18Q9CQ07 262 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Xlr4bQ9JJQ7 215 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Pcsk2P21661 637 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Havcr1Q5QNS5 305 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ttf1Q62187 859 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Sdc3Q64519 442 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Vmn1r215Q8R264 300 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Itgbl1Q8VDV0 494 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr791Q8VGJ0 312 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Elp2Q91WG4 831 aaKnown RBP14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Polr2aP08775 1970 aaKnown RBP14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 VirmaA2AIV2 1811 aaKnown RBP14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr560A0A1B0GSU5 314 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm20547B8JJN0 1276 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm6569D3YTM9 175 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 CfbP04186 761 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 HexaP29416 528 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Htr7P32304 448 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 RptnP97347 1118 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Sec1P97353 368 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Ctu2Q3U308 514 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Nlrc3Q5DU56 1064 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Slc26a10Q5EBI0 492 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Usf2Q64705 346 aaKnown RBP14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr1318Q7TQW6 320 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gm10330Q8BKS1 112 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Olfr1317Q8VF84 316 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Pcdhb20Q91XZ9 799 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Isoc2bQ9DCC7 210 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 GmfgQ9ERL7 142 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Adam28Q9JLN6 793 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Gdf2Q9WV56 428 aa14.71□□□□□ -0.05
Ccdc88b-201ENSMUST00000113440 Zfc3h1B2RT41 1992 aaKnown RBP14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Lrrc72A0A1Y7VMI0 288 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gpx5P21765 221 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Alg8Q6P8H8 526 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Adamtsl4Q80T21 1036 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 AardQ811W1 167 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Nceh1Q8BLF1 408 aaKnown RBP14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Pramef8Q8CE24 480 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Steap3Q8CI59 488 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 CcsapQ8QZT2 252 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr1387Q8VFA9 311 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Cox4i2Q91W29 172 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 As3mtQ91WU5 376 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Asb9Q91ZT8 290 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Taar1Q923Y8 332 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Sorcs1Q9JLC4 1167 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Slc7a7Q9Z1K8 510 aa14.71□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Hmgn1P18608 96 aaKnown RBP14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 TsxP70675 144 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 PrtgQ2EY15 1191 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Tns4Q8BZ33 696 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Rnf222Q8CEF8 211 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr450Q8VF81 310 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Olfr651Q8VG78 313 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Hyal6Q9D4E9 494 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Actr6Q9D864 396 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Tprg1lQ9DBS2 266 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 5430401F13RikE9Q328 175 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Gm1110F6Y113 635 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Nudt19P11930 357 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 IduaP48441 634 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 ElocP83940 112 aaKnown RBP14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Kcnj8P97794 424 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 ToxQ66JW3 526 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Supv3l1Q80YD1 779 aaKnown RBP14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Nudt15Q8BG93 170 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Mfsd8Q8BH31 519 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Bend7Q8BSV3 434 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Akr1c18Q8K023 323 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 3300002I08RikQ9CXH3 147 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 NynrinQ5DTZ0 1840 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Zfp534A2A7A1 661 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 Vmn1r88E9Q235 316 aa14.7□□□□□ -0.06
Ccdc88b-201ENSMUST00000113440 UbqlnlQ14DL0 610 aa14.7□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms