RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 OR4C11Q6IEV9 310 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 FIGNL1Q6PIW4 674 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 ELOA3Q8NG57 546 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 OR14C36Q8NHC7 312 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 CD99L2Q8TCZ2 262 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 GIMAP1Q8WWP7 306 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 HSPA12BQ96MM6 686 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 WDR26Q9H7D7 661 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 MVB12BQ9H7P6 319 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 FBXO9Q9UK97 447 aaPredicted RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 SLC7A7Q9UM01 511 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 LIPT1Q9Y234 373 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 POLR1DQ9Y2S0 133 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 BACE2Q9Y5Z0 518 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 A0A0G2JPF8 293 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 A0A1W2PQ45 241 aaPredicted RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 A0A1W2PQY0 241 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 HNRNPCL3B7ZW38 293 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 SOCS6O14544 535 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 SOX30O94993 753 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 HNRNPCL4P0DMR1 293 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 PIPP12273 146 aaPredicted RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 SNRPBP14678 240 aaKnown RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 SOX18P35713 384 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 KCNJ5P48544 419 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 ARL4DP49703 201 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 CCR6P51684 374 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 ADAM8P78325 824 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 FXNQ16595 210 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 SLC22A10Q63ZE4 541 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 METAP1DQ6UB28 335 aaPredicted RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 ZNF627Q7L945 461 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 KRT77Q7Z794 578 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 OR4E2Q8NGC2 313 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 OR4M1Q8NGD0 313 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 ADAD1Q96M93 576 aaKnown RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 C1QTNF7Q9BXJ2 289 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 SLC6A15Q9H2J7 730 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 SPHK2Q9NRA0 654 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 TAS2R3Q9NYW6 316 aa9.91□□□□□ -0.82
USB1-212ENST00000566082 URB1O60287 2271 aaKnown RBP9.91□□□□□ -0.82
USB1-212ENST00000566082 A0A1B0GVI7 797 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 GFYI3L273 518 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 CA12O43570 354 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 FZD7O75084 574 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 SLC22A5O76082 557 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 NPPBP16860 134 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 PRKACAP17612 351 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 HLA-DMAP28067 261 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 CTNNB1P35222 781 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 OC90Q02509 493 aaPredicted RBP9.9□□□□□ -0.82
USB1-212ENST00000566082 CHRNEQ04844 493 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 GPR176Q14439 515 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 SLC8B1Q6J4K2 584 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 FAM198BQ6UWH4 519 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 LRRN1Q6UXK5 716 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 KLHDC8AQ8IYD2 350 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 OR4K13Q8NH42 304 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 ZNF563Q8TA94 476 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 PMEPA1Q969W9 287 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 ZMYND19Q96E35 227 aaPredicted RBP9.9□□□□□ -0.82
USB1-212ENST00000566082 LGR4Q9BXB1 951 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 SLC7A5P2Q9GIP4 190 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 COMMD4Q9H0A8 199 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 MKKSQ9NPJ1 570 aaPredicted RBP9.9□□□□□ -0.82
USB1-212ENST00000566082 MARCH5Q9NX47 278 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 NDOR1Q9UHB4 597 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 COL11A1P12107 1806 aaPredicted RBP9.9□□□□□ -0.82
USB1-212ENST00000566082 ANTXRLA6NF34 631 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 FZD6O60353 706 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 PRKRAO75569 313 aaKnown RBP9.9□□□□□ -0.82
USB1-212ENST00000566082 PAK4O96013 591 aaPredicted RBP9.9□□□□□ -0.82
USB1-212ENST00000566082 IFNA6P05013 189 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 HBQ1P09105 142 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 C6P13671 934 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 GRK6P43250 576 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 SEC23BQ15437 767 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 ZER1Q7Z7L7 766 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 NLRP8Q86W28 1048 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 MS4A15Q8N5U1 240 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 POMGNT2Q8NAT1 580 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 OR52E2Q8NGJ4 325 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 WDR20Q8TBZ3 569 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 C16orf58Q96GQ5 468 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 C4orf36Q96KX1 117 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 SAV1Q9H4B6 383 aaPredicted RBP9.9□□□□□ -0.82
USB1-212ENST00000566082 RCE1Q9Y256 329 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 ARID2Q68CP9 1835 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 COL11A2P13942 1736 aaPredicted RBP9.9□□□□□ -0.82
USB1-212ENST00000566082 CENPFP49454 3210 aa9.9□□□□□ -0.82
USB1-212ENST00000566082 BLOC1S5-TXNDC5H3BN57 136 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 RGS13O14921 159 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 LRRTM2O43300 516 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 B3GALT2O43825 422 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 KRT33AO76009 404 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 ECDO95905 644 aaPredicted RBP9.9□□□□□ -0.83
USB1-212ENST00000566082 S100A6P06703 90 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 GKN3PP0CG01 181 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 ELK1P19419 428 aa9.9□□□□□ -0.83
USB1-212ENST00000566082 CD22P20273 847 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms