RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 PLET1Q6UQ28 207 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 C6orf15Q6UXA7 325 aaPredicted RBP16.3■□□□□ 0.2
PTPN21-208ENST00000556564 TNFAIP8L1Q8WVP5 186 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 SECISBP2Q96T21 854 aaKnown RBP16.3■□□□□ 0.2
PTPN21-208ENST00000556564 SLC35A3Q9Y2D2 325 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 DPPA5A6NC42 116 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 IRF2P14316 349 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 PCGF2P35227 344 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 ETV4P43268 484 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 SLCO4C1Q6ZQN7 724 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 GALNT6Q8NCL4 622 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 GATAD2BQ8WXI9 593 aa16.3■□□□□ 0.2
PTPN21-208ENST00000556564 CNN2Q99439 309 aaKnown RBP16.3■□□□□ 0.2
PTPN21-208ENST00000556564 ATAD5Q96QE3 1844 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 LOC100509620A0A075B734 347 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 FTCDNL1E5RQL4 147 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 TAPBPO15533 448 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 DHRS4L1P0CG22 281 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 PNMTP11086 282 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 SMAD2Q15796 467 aaKnown RBP16.29■□□□□ 0.2
PTPN21-208ENST00000556564 ZNF423Q2M1K9 1284 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 COQ5Q5HYK3 327 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 AGBL4Q5VU57 503 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 IGFN1Q86VF2 1251 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 RIMS3Q9UJD0 308 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 COLQQ9Y215 455 aaPredicted RBP16.29■□□□□ 0.2
PTPN21-208ENST00000556564 FAM172BPA6NC97 362 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 RASAL1O95294 804 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 RIDAP52758 137 aaKnown RBP16.29■□□□□ 0.2
PTPN21-208ENST00000556564 PIGFQ07326 219 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 SYT13Q7L8C5 426 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 HLA-DPB1P04440 258 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 GABRG2P18507 467 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 RAB39AQ14964 217 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 OR4K5Q8NGD3 323 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 RAB2BQ8WUD1 216 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 BORCS5Q969J3 196 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 MUS81Q96NY9 551 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 CDC6Q99741 560 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 CDH20Q9HBT6 801 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 RNF215Q9Y6U7 377 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 SCN4AP35499 1836 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 MSX1P28360 303 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 RPS5P46782 204 aaKnown RBP16.29■□□□□ 0.2
PTPN21-208ENST00000556564 DPY19L2P1Q6NXN4 242 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 OR9Q2Q8NGE9 314 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 OR1J4Q8NGS1 313 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 BORCS8Q96FH0 119 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 KCND3Q9UK17 655 aa16.29■□□□□ 0.2
PTPN21-208ENST00000556564 ZNF16P17020 682 aaPredicted RBP16.28■□□□□ 0.2
PTPN21-208ENST00000556564 TMEM236Q5W0B7 351 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 ZNF782Q6ZMW2 699 aaPredicted RBP16.28■□□□□ 0.2
PTPN21-208ENST00000556564 ASB18Q6ZVZ8 466 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 SNX29P2Q8IUI4 249 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 ARMC1Q9NVT9 282 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 IGHV3-20A0A0C4DH32 117 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 C8BP07358 591 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 SELENOWP63302 87 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 FAM111BQ6SJ93 734 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 DGLUCYQ7Z3D6 616 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 WASH6PQ9NQA3 447 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 SACM1LQ9NTJ5 587 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 SH3D21A4FU49 640 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 SORBS2O94875 1100 aaKnown RBP16.28■□□□□ 0.2
PTPN21-208ENST00000556564 ST3GAL4Q11206 333 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 ZNF750Q32MQ0 723 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 SHFQ7M4L6 423 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 DNAJA4Q8WW22 397 aaPredicted RBP16.28■□□□□ 0.2
PTPN21-208ENST00000556564 LRR1Q96L50 414 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 TMEM121BQ9BXQ6 578 aaPredicted RBP16.28■□□□□ 0.2
PTPN21-208ENST00000556564 CLMPQ9H6B4 373 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 METTL21EPA6NDL7 271 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 HSPA12AO43301 675 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 CDKN2CP42773 168 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 MAP2K4P45985 399 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 OCLNQ16625 522 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 OR51L1Q8NGJ5 315 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 VAPAQ9P0L0 249 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 R4GN57 208 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 CSNK1G2P78368 415 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 FOXC1Q12948 553 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 NPRL3Q12980 569 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 TMEM64Q6YI46 380 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 FEVQ99581 238 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 GINS4Q9BRT9 223 aa16.28■□□□□ 0.2
PTPN21-208ENST00000556564 XPNPEP2O43895 674 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 PFN3P60673 137 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 CSNK2A1P68400 391 aaPredicted RBP16.27■□□□□ 0.2
PTPN21-208ENST00000556564 SPEM2Q0P670 501 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 TIGD4Q8IY51 512 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 CFHR5Q9BXR6 569 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 CARD8Q9Y2G2 431 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 GPR45Q9Y5Y3 372 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 A0A1B0GX78 115 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 MAGEA3P43357 314 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 CCDC92Q53HC0 331 aaPredicted RBP16.27■□□□□ 0.2
PTPN21-208ENST00000556564 UBXN10Q96LJ8 280 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 OR10A5Q9H207 317 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 LRRN3Q9H3W5 708 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 ENPP4Q9Y6X5 453 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms