RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ATP6V1HQ9UI12 483 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 FBXW2Q9UKT8 454 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 CES1P1Q9UKY3 287 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 SLC45A2Q9UMX9 530 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 EXO1Q9UQ84 846 aaKnown RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 FARSAQ9Y285 508 aaKnown RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 COPG1Q9Y678 874 aaKnown RBP5.35□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF780BQ9Y6R6 833 aa5.35□□□□□ -1.55
SCAF11-213ENST00000550629 NCOR2Q9Y618 2525 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 LOC102723996A0A087X1L8 192 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 MYO1GB0I1T2 1018 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 FAM227AF5H4B4 570 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 NDUFAB1O14561 156 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 PGRMC2O15173 223 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 B4GALT2O60909 372 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 CNOT3O75175 753 aaKnown RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 DNAJB6O75190 326 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 SLC43A1O75387 559 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 ATP1B1P05026 303 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 HEXBP07686 556 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 UMODP07911 640 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 C8orf89P0DMQ9 161 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 CPMP14384 443 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 COX7A2P14406 83 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 NCF2P19878 526 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 GPX3P22352 226 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 MMP11P24347 488 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 PIK3R1P27986 724 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 MPIP34949 423 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 DLSTP36957 453 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 FRKP42685 505 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 STT3AP46977 705 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 POLR2JP52435 117 aaKnown RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 EMP2P54851 167 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 PLIN5Q00G26 463 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 MC1RQ01726 317 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 STX4Q12846 297 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 RCAN2Q14206 197 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 MLC1Q15049 377 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 MAPRE2Q15555 327 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 NSDHLQ15738 373 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 SYT16Q17RD7 645 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 MINDY4Q4G0A6 757 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 VWA2Q5GFL6 755 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 CPTPQ5TA50 214 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 ANXA8L1Q5VT79 327 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 MLIPQ5VWP3 458 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 FAM91A1Q658Y4 838 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 C18orf63Q68DL7 685 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 LCN10Q6JVE6 187 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 FAM199XQ6PEV8 388 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 TMEM205Q6UW68 189 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 Q6ZNX1 250 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 TICAM1Q8IUC6 712 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 ST13P4Q8IZP2 240 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 LRRC25Q8N386 305 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 FAM47BQ8NA70 645 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 CCDC197Q8NCU1 140 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 VPS37AQ8NEZ2 397 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 BCAS4Q8TDM0 211 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 KCNE4Q8WWG9 221 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 ANKRD9Q96BM1 317 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 KLHL29Q96CT2 875 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 ZBED6CLQ96FA7 236 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 THOC1Q96FV9 657 aaKnown RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 SLC45A3Q96JT2 553 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 EGLN2Q96KS0 407 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 ZNF681Q96N22 645 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 TSSK3Q96PN8 268 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 CSF3RQ99062 836 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 VRK1Q99986 396 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 AIFM2Q9BRQ8 373 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 CRB3Q9BUF7 120 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 DPY30Q9C005 99 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 VN1R1Q9GZP7 353 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 AKIRIN1Q9H9L7 192 aaPredicted RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 SLC35C2Q9NQQ7 365 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 SAR1AQ9NR31 198 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 PRTFDC1Q9NRG1 225 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 FAM120CQ9NX05 1096 aaKnown RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 JKAMPQ9P055 326 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 HEY2Q9UBP5 337 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 BAIAP2L1Q9UHR4 511 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 C3orf18Q9UK00 162 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 UTS2RQ9UKP6 389 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 PPIEQ9UNP9 301 aaKnown RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 ENTPD4Q9Y227 616 aa5.34□□□□□ -1.55
SCAF11-213ENST00000550629 PTRH2Q9Y3E5 179 aaKnown RBP5.34□□□□□ -1.55
SCAF11-213ENST00000550629 FREM2Q5SZK8 3169 aa5.34□□□□□ -1.56
SCAF11-213ENST00000550629 MDC1Q14676 2089 aaKnown RBP5.33□□□□□ -1.56
SCAF11-213ENST00000550629 LOC101059948A0A1B0GTJ6 334 aa5.33□□□□□ -1.56
SCAF11-213ENST00000550629 PRSS51A0A1B0GVH4 220 aa5.33□□□□□ -1.56
SCAF11-213ENST00000550629 GLOD5A6NK44 160 aa5.33□□□□□ -1.56
SCAF11-213ENST00000550629 GABRR3A8MPY1 467 aa5.33□□□□□ -1.56
SCAF11-213ENST00000550629 BBIP1A8MTZ0 92 aa5.33□□□□□ -1.56
SCAF11-213ENST00000550629 FCHO1O14526 889 aa5.33□□□□□ -1.56
SCAF11-213ENST00000550629 CFLARO15519 480 aa5.33□□□□□ -1.56
SCAF11-213ENST00000550629 RRP8O43159 456 aaKnown RBP5.33□□□□□ -1.56
SCAF11-213ENST00000550629 AKAP10O43572 662 aa5.33□□□□□ -1.56
SCAF11-213ENST00000550629 FGF17O60258 216 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms