RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 NKIRAS2Q9NYR9 191 aa7.43□□□□□ -1.22
DDX47-212ENST00000545038 MRPL15Q9P015 296 aaKnown RBP7.43□□□□□ -1.22
DDX47-212ENST00000545038 ADAM30Q9UKF2 790 aa7.43□□□□□ -1.22
DDX47-212ENST00000545038 COPS3Q9UNS2 423 aa7.43□□□□□ -1.22
DDX47-212ENST00000545038 KLF2Q9Y5W3 355 aaPredicted RBP7.43□□□□□ -1.22
DDX47-212ENST00000545038 HEATR5BQ9P2D3 2071 aa7.43□□□□□ -1.22
DDX47-212ENST00000545038 DENND4AQ7Z401 1863 aa7.43□□□□□ -1.22
DDX47-212ENST00000545038 COL4A3Q01955 1670 aa7.43□□□□□ -1.22
DDX47-212ENST00000545038 C5orf58C9J3I9 102 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 SELENOFO60613 162 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 EFCAB14O75071 495 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 CBX7O95931 251 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 FGF2P09038 288 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 UGT2B7P16662 529 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 NPPBP16860 134 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 PTNP21246 168 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 ACSL1P33121 698 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 ERVFC1P60507 584 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 KLF9Q13886 244 aaPredicted RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 SLBPQ14493 270 aaKnown RBP eCLIP7.42□□□□□ -1.22
DDX47-212ENST00000545038 ZSWIM7Q19AV6 140 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 MED27Q6P2C8 311 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 BTN2A1Q7KYR7 527 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 TAS1R1Q7RTX1 841 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 FGD2Q7Z6J4 655 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 TMEM173Q86WV6 379 aaPredicted RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 C17orf47Q8NEP4 570 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 LINC01599Q8WXQ3 324 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 ACOT12Q8WYK0 555 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 ATOH1Q92858 354 aaPredicted RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 ASIC4Q96FT7 647 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 NPAS1Q99742 590 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 NRTNQ99748 197 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 C19orf43Q9BQ61 176 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 QRSL1Q9H0R6 528 aaKnown RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 C20orf85Q9H1P6 137 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 NPDC1Q9NQX5 325 aaPredicted RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 SEC14L3Q9UDX4 400 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 ZNF175Q9Y473 711 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 UNC80Q8N2C7 3258 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 OR5K4A6NMS3 321 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 TMEM189-UBE2V1I3L0A0 370 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 RTCAO00442 366 aaKnown RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 SURF4O15260 269 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 INPPL1O15357 1258 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 FRS3O43559 492 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 RGS9O75916 674 aaPredicted RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 GNSP15586 552 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 VEGFCP49767 419 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 CTSCP53634 463 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 STXBP1P61764 594 aaKnown RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 HSPB3Q12988 150 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 GPR17Q13304 367 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 SFRP4Q6FHJ7 346 aaPredicted RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 PYHIN1Q6K0P9 492 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 TPRG1Q6ZUI0 275 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 CMIPQ8IY22 773 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 IZUMO1Q8IYV9 350 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 BVESQ8NE79 360 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 OR13C5Q8NGS8 318 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 OR52N1Q8NH53 320 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 COQ8AQ8NI60 647 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 SMAP2Q8WU79 429 aaPredicted RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 ZNF480Q8WV37 535 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 HMGB4Q8WW32 186 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 PIGKQ92643 395 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 ECHDC3Q96DC8 303 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 FAM46AQ96IP4 442 aaKnown RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 ERMAPQ96PL5 475 aaPredicted RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 TBX5Q99593 518 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 SMAD5Q99717 465 aaKnown RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 USB1Q9BQ65 265 aaKnown RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 FNDC11Q9BVV2 318 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 AP5M1Q9H0R1 490 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 POLMQ9NP87 494 aaPredicted RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 HINT3Q9NQE9 182 aaKnown RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 MARK1Q9P0L2 795 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 PTGFRNQ9P2B2 879 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 RGS17Q9UGC6 210 aaPredicted RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 SPATA2Q9UM82 520 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 ICKQ9UPZ9 632 aa7.42□□□□□ -1.22
DDX47-212ENST00000545038 EXOGQ9Y2C4 368 aaKnown RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 MRPS7Q9Y2R9 242 aaKnown RBP7.42□□□□□ -1.22
DDX47-212ENST00000545038 PLXNA2O75051 1894 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 TRABD2BA6NFA1 517 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 TUBAL3A6NHL2 446 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 ZNF98A6NK75 572 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 ANXA2P2A6NMY6 339 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 SYN3O14994 580 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 TSPAN6O43657 245 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 HYAL3O43820 417 aaPredicted RBP7.41□□□□□ -1.22
DDX47-212ENST00000545038 BNIP3LO60238 219 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 GREM1O60565 184 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 GALR3O60755 368 aaPredicted RBP7.41□□□□□ -1.22
DDX47-212ENST00000545038 PTP4A3O75365 173 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 PLATP00750 562 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 TFP02787 698 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 PEPDP12955 493 aa7.41□□□□□ -1.22
DDX47-212ENST00000545038 SNRPBP14678 240 aaKnown RBP7.41□□□□□ -1.22
DDX47-212ENST00000545038 HMGA1P17096 107 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms