RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	RPRML	Q8N4K4	120 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	ZNF614	Q8N883	585 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	WDSUB1	Q8N9V3	476 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	FAM83F	Q8NEG4	500 aa	Predicted RBP	10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	OR5D16	Q8NGK9	328 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	NEIL3	Q8TAT5	605 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	SDCCAG3	Q96C92	435 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	GIMAP5	Q96F15	307 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	SLC35G5	Q96KT7	338 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	OR52E6	Q96RD3	313 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	ACTRT3	Q9BYD9	372 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	TP63	Q9H3D4	680 aa	Predicted RBP	10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	SDHAF3	Q9NRP4	125 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	FBXO34	Q9NWN3	711 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	COQ3	Q9NZJ6	369 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	FBXL2	Q9UKC9	423 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	WIF1	Q9Y5W5	379 aa		10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	DIDO1	Q9BTC0	2240 aa	Known RBP	10.08	□□□□□ -0.8
DDB1-222	ENST00000543627	ZNF407	Q9C0G0	2248 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	UTP20	O75691	2785 aa	Known RBP	10.07	□□□□□ -0.8
DDB1-222	ENST00000543627		A0A1B0GVC2	190 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	PRSS51	A0A1B0GVH4	220 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	OR14I1	A6ND48	311 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	TTC36	A6NLP5	189 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	FIGNL2	A6NMB9	653 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627		E9PBE3	544 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627		E9PLN8	166 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	POLR3G	O15318	223 aa	Predicted RBP	10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	SLC22A3	O75751	556 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	KCNK2	O95069	426 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	PSMG1	O95456	288 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	ANP32D	O95626	131 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	ANGPTL1	O95841	491 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	GSN	P06396	782 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	GP1BB	P13224	206 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	IL12A	P29459	219 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	STAR	P49675	285 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	AQP5	P55064	265 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	WNT3	P56703	355 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	ADORA2A-AS1	P86434	159 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	HSP90B2P	Q58FF3	399 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	EMC4	Q5J8M3	183 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	TMEM211	Q6ICI0	200 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	CDC73	Q6P1J9	531 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	ZCCHC12	Q6PEW1	402 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	MAMDC2	Q7Z304	686 aa	Predicted RBP	10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	OR5M1	Q8NGP8	315 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	CKAP2	Q8WWK9	683 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	ABTB1	Q969K4	478 aa	Predicted RBP	10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	MOAP1	Q96BY2	351 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	C7orf26	Q96N11	449 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	OR7D2	Q96RA2	312 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	PANX1	Q96RD7	426 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	VKORC1	Q9BQB6	163 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	BTBD2	Q9BX70	525 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	NEUROD4	Q9HD90	331 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	ACKR4	Q9NPB9	350 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	PLSCR2	Q9NRY7	297 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	QPCTL	Q9NXS2	382 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	TAS2R10	Q9NYW0	307 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	GPR45	Q9Y5Y3	372 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	KCNE3	Q9Y6H6	103 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	HIVEP3	Q5T1R4	2406 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	NCKAP5	O14513	1909 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	POLE	Q07864	2286 aa		10.07	□□□□□ -0.8
DDB1-222	ENST00000543627	NUP214	P35658	2090 aa	Predicted RBP	10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	FREM3	P0C091	2139 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	WIPF3	A6NGB9	483 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	RNASET2	O00584	256 aa	Known RBP	10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	SCD	O00767	359 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	NDUFB5	O43674	189 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	FADS1	O60427	444 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	HPN	P05981	417 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	SNRPB2	P08579	225 aa	Known RBP	10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	KRT16	P08779	473 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	OR12D1	P0DN82	309 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	IDO1	P14902	403 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	BMP7	P18075	431 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	HK1	P19367	917 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	ENDOU	P21128	410 aa	Known RBP	10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	UQCRC2	P22695	453 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	ACVR2A	P27037	513 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	DPP4	P27487	766 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	IDH3A	P50213	366 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	STX1B	P61266	288 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	PHC1	P78364	1004 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	DCST2	Q5T1A1	773 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	RAET1L	Q5VY80	246 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	OGFOD2	Q6N063	350 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	EPGN	Q6UW88	154 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	RPTN	Q6XPR3	784 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	B3GNT6	Q6ZMB0	384 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	OLIG3	Q7RTU3	272 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	CAMKMT	Q7Z624	323 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	ZAR1	Q86SH2	424 aa		10.06	□□□□□ -0.8
DDB1-222	ENST00000543627	IFNE	Q86WN2	208 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms