RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 HLA-FP30511 346 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 SMARCD3Q6STE5 483 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 FGD2Q7Z6J4 655 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 OR6T1Q8NGN1 323 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 HMGB4Q8WW32 186 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 SCAMP4Q969E2 229 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.9□□□□□ -0.34
NPHP4-207ENST00000470763 PRO3102Q9H379 93 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 DDX31Q9H8H2 851 aaKnown RBP12.9□□□□□ -0.34
NPHP4-207ENST00000470763 ACAD8Q9UKU7 415 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 ACSL5Q9ULC5 683 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 A0A1W2PRQ8 180 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 FAM183AA6NL82 134 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 SLC16A5O15375 505 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 B4GALT2O60909 372 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 SLC2A10O95528 541 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 TFP02787 698 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 SMIM11AP58511 58 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 EIF2B5Q13144 721 aaKnown RBP12.9□□□□□ -0.34
NPHP4-207ENST00000470763 FZD5Q13467 585 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 ETFDHQ16134 617 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 PLEKHS1Q5SXH7 462 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 PYHIN1Q6K0P9 492 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 FAM198BQ6UWH4 519 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 CBARPQ8N350 705 aaPredicted RBP12.9□□□□□ -0.34
NPHP4-207ENST00000470763 MORN4Q8NDC4 146 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 ZNF740Q8NDX6 193 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 OR51G2Q8NGK0 314 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 RADILQ96JH8 1075 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 TREX2Q9BQ50 279 aaPredicted RBP12.9□□□□□ -0.34
NPHP4-207ENST00000470763 ZNF649Q9BS31 505 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 TMEM168Q9H0V1 697 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 AUNIPQ9H7T9 357 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 SYNDIG1Q9H7V2 258 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 PCDHB16Q9NRJ7 776 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 TDP1Q9NUW8 608 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 ZNF175Q9Y473 711 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 CSNK1G3Q9Y6M4 447 aa12.9□□□□□ -0.34
NPHP4-207ENST00000470763 HMGN4O00479 90 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 MAPK9P45984 424 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 MTNR1BP49286 362 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 MANFP55145 182 aaKnown RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 C1orf94Q6P1W5 598 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 ARL9Q6T311 187 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 ZNF322Q6U7Q0 402 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 GLB1LQ6UWU2 654 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 SLCO4C1Q6ZQN7 724 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 OVCH2Q7RTZ1 564 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 SIRT6Q8N6T7 355 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 POGLUT1Q8NBL1 392 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 ZFPM2Q8WW38 1151 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 GCDHQ92947 438 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 C20orf85Q9H1P6 137 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 KLHL42Q9P2K6 505 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 COL6A3P12111 3177 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 ZC3H12DA2A288 527 aaKnown RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 CHURC1-FNTBB4DL54 471 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 KRBOX1C9JBD0 128 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 SOCS6O14544 535 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 PDCD5O14737 125 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 ATP5A1P25705 553 aaKnown RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 VEGFCP49767 419 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 AKR1D1P51857 326 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 SNTB2Q13425 540 aaKnown RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 HSD17B12Q53GQ0 312 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 HECTD3Q5T447 861 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 BTN2A1Q7KYR7 527 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 DGLUCYQ7Z3D6 616 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 SYT9Q86SS6 491 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 C7orf61Q8IZ16 206 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 OR4D9Q8NGE8 314 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 XAGE5Q8WWM1 108 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 THAP4Q8WY91 577 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 CNOT9Q92600 299 aaKnown RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 FAM46AQ96IP4 442 aaKnown RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 GSDMCQ9BYG8 508 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 BTBD1Q9H0C5 482 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 MYNNQ9NPC7 610 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 DMRT3Q9NQL9 472 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 ASB6Q9NWX5 421 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 PFDN2Q9UHV9 154 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 GMEB2Q9UKD1 530 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 PRAMEF27A3QJZ7 478 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 KDM4EB2RXH2 506 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 KDM4BO94953 1096 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 GNSP15586 552 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 PBLDP30039 288 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-207ENST00000470763 PTGER1P34995 402 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 TRIM23P36406 574 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 KCNA10Q16322 511 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 CLLU1OSQ5K130 101 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 KIAA1211LQ6NV74 962 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 C6orf120Q7Z4R8 191 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 UXS1Q8NBZ7 420 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 OR51Q1Q8NH59 317 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 ASZ1Q8WWH4 475 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 SEC22CQ9BRL7 303 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 ORAI3Q9BRQ5 295 aa12.89□□□□□ -0.35
NPHP4-207ENST00000470763 OR10A4Q9H209 315 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms