RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 IDH3AP50213 366 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 POU6F2P78424 691 aaPredicted RBP10.84□□□□□ -0.67
VPS52-213ENST00000461743 GANABQ14697 944 aaKnown RBP10.84□□□□□ -0.67
VPS52-213ENST00000461743 SLC10A1Q14973 349 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 DUSP5Q16690 384 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 FNDC7Q5VTL7 733 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 BICRALQ6AI39 1079 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 TRILQ7L0X0 811 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 SPPL2CQ8IUH8 684 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 CLECL1Q8IZS7 167 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 SLC16A11Q8NCK7 471 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 FAM57AQ8TBR7 257 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 FAM110BQ8TC76 370 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 ADAMTS15Q8TE58 950 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 SSC4DQ8WTU2 575 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 OIT3Q8WWZ8 545 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 NEURL3Q96EH8 262 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 TEX37Q96LM6 180 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 JSRP1Q96MG2 331 aaPredicted RBP10.84□□□□□ -0.67
VPS52-213ENST00000461743 RMND5AQ9H871 391 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 SDHAF3Q9NRP4 125 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 SUCOQ9UBS9 1254 aaKnown RBP10.84□□□□□ -0.67
VPS52-213ENST00000461743 TRIM33Q9UPN9 1127 aa10.84□□□□□ -0.67
VPS52-213ENST00000461743 TRGV5A0A0B4J1U4 118 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 A0A1W2PQD3 144 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 GXYLT2A0PJZ3 443 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 FAM234BA2RU67 622 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 EBAG9O00559 213 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 FADS1O60427 444 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 NME6O75414 186 aaPredicted RBP10.83□□□□□ -0.68
VPS52-213ENST00000461743 CBR3O75828 277 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 KCNK2O95069 426 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 GUSBP08236 651 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 IL12AP29459 219 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 GCKP35557 465 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 MAN2A2P49641 1150 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 KHKP50053 298 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 ANXA11P50995 505 aaKnown RBP10.83□□□□□ -0.68
VPS52-213ENST00000461743 GAS1P54826 345 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 PHC1P78364 1004 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 SRSF1Q07955 248 aaKnown RBP eCLIP10.83□□□□□ -0.68
VPS52-213ENST00000461743 RCAN2Q14206 197 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 SQLEQ14534 574 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 SAXO2Q658L1 398 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 ANGPTL8Q6UXH0 198 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 WDR53Q7Z5U6 358 aaPredicted RBP10.83□□□□□ -0.68
VPS52-213ENST00000461743 PLCZ1Q86YW0 608 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 MISPQ8IVT2 679 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 OR5AK3PQ8NH89 298 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 NEIL3Q8TAT5 605 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 PHF10Q8WUB8 498 aaKnown RBP10.83□□□□□ -0.68
VPS52-213ENST00000461743 NUDT8Q8WV74 236 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 PIK3R3Q92569 461 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 SARAFQ96BY9 339 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 OR52E6Q96RD3 313 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 EBF4Q9BQW3 602 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 OR2B2Q9GZK3 357 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 TP63Q9H3D4 680 aaPredicted RBP10.83□□□□□ -0.68
VPS52-213ENST00000461743 RABEP2Q9H5N1 569 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 GALNT9Q9HCQ5 603 aa10.83□□□□□ -0.68
VPS52-213ENST00000461743 ERRFI1Q9UJM3 462 aaPredicted RBP10.83□□□□□ -0.68
VPS52-213ENST00000461743 MRPS18CQ9Y3D5 142 aaKnown RBP10.83□□□□□ -0.68
VPS52-213ENST00000461743 FLNBO75369 2602 aaKnown RBP10.83□□□□□ -0.68
VPS52-213ENST00000461743 UTP20O75691 2785 aaKnown RBP10.82□□□□□ -0.68
VPS52-213ENST00000461743 MED12Q93074 2177 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 IGLV3-32A0A0A0MS00 114 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 TRGV8A0A0C4DH27 118 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 A0A1B0GTH9 108 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 WIPF3A6NGB9 483 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 FIGNL2A6NMB9 653 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 ALG1L2C9J202 215 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 SEMA7AO75326 666 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 UTS2O95399 124 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 LDLRP01130 860 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 RFPL3SP0C7P2 107 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 ZCCHC18P0CG32 403 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 TROVE2P10155 538 aaKnown RBP eCLIP10.82□□□□□ -0.68
VPS52-213ENST00000461743 ATP6V1C1P21283 382 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 TBXA2RP21731 343 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 SRD5A2P31213 254 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 CHI3L1P36222 383 aaPredicted RBP10.82□□□□□ -0.68
VPS52-213ENST00000461743 ZFP36L2P47974 494 aaKnown RBP10.82□□□□□ -0.68
VPS52-213ENST00000461743 POLR2JP52435 117 aaKnown RBP10.82□□□□□ -0.68
VPS52-213ENST00000461743 NME5P56597 212 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 HSF1Q00613 529 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 NHSL2Q5HYW2 709 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 DCST2Q5T1A1 773 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 C1QL3Q5VWW1 255 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 RPTNQ6XPR3 784 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 C6orf120Q7Z4R8 191 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 FGD2Q7Z6J4 655 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 ANKRD46Q86W74 232 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 FADS6Q8N9I5 356 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 ZNF527Q8NB42 609 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 CHDHQ8NE62 594 aaPredicted RBP10.82□□□□□ -0.68
VPS52-213ENST00000461743 FBXO30Q8TB52 745 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 CDS1Q92903 461 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 CHMP6Q96FZ7 201 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 C16orf58Q96GQ5 468 aa10.82□□□□□ -0.68
VPS52-213ENST00000461743 MARK4Q96L34 752 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms