RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 C3orf38Q5JPI3 329 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 OR4F15Q8NGB8 312 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 CHTF18Q8WVB6 975 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 POLMQ9NP87 494 aaPredicted RBP16.41■□□□□ 0.22
PTPRU-202ENST00000373779 PRTFDC1Q9NRG1 225 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 NPIPA1Q9UND3 350 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 HYKKA2RU49 373 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 RLN2P04090 185 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 CSF2RAP15509 400 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 UQCRC1P31930 480 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 MAN2A2P49641 1150 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 SLC29A4Q7RTT9 530 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 TMIEQ8NEW7 156 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 OR51J1Q9H342 316 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 HCFC1R1Q9NWW0 138 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 MKL2Q9ULH7 1088 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 GABRPO00591 440 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 CRYZL1O95825 349 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 RAB2AP61019 212 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 C6orf132Q5T0Z8 1188 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 USP51Q70EK9 711 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 CYB561A3Q8NBI2 242 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 TMEM239Q8WW34 195 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 FAM83CQ9BQN1 747 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 FMO6PO60774 539 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 B3GALT4O96024 378 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 CST6Q15828 149 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 HES5Q5TA89 166 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 SMPDL3BQ92485 455 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 SCGB3A2Q96PL1 93 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 SLC22A12Q96S37 553 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.41■□□□□ 0.225e-7■□□□□ 10
PTPRU-202ENST00000373779 ATG5Q9H1Y0 275 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 NT5DC2Q9H857 520 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 NANSQ9NR45 359 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 CUEDC1Q9NWM3 386 aaPredicted RBP16.41■□□□□ 0.22
PTPRU-202ENST00000373779 PLEKHA6Q9Y2H5 1048 aa16.41■□□□□ 0.22
PTPRU-202ENST00000373779 ELAVL4P26378 380 aaKnown RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 LRRC26Q2I0M4 334 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 TP53I3Q53FA7 332 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 LSM14AQ8ND56 463 aaKnown RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 SIMC1Q8NDZ2 872 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 OR2A12Q8NGT7 310 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 WDR92Q96MX6 357 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 SRA1Q9HD15 236 aaKnown RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 NDRG2Q9UN36 371 aaKnown RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 NUP205Q92621 2012 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 C13orf42A0A1B0GVH6 325 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 RNF13O43567 381 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 CDC123O75794 336 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 PRR35P0CG20 571 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 HSD11B1P28845 292 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 FNTBP49356 437 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 GAB1Q13480 694 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 NNATQ16517 81 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 LRRC28Q86X40 367 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 ZNF471Q9BX82 626 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 CXorf36Q9H7Y0 433 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 PRODH2Q9UF12 536 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 GPN3Q9UHW5 284 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 DIMT1Q9UNQ2 313 aaKnown RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 PAHP00439 452 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 SPARCP09486 303 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 VIPR2P41587 438 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 CBX5P45973 191 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 KCNJ10P78508 379 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 ATXN7L3Q14CW9 347 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 METAP1DQ6UB28 335 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 VRK2Q86Y07 508 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 TOR1AIP2Q8NFQ8 470 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 WFDC5Q8TCV5 224 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 ZNF582Q96NG8 517 aaPredicted RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 C1QTNF2Q9BXJ5 285 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 GABARAPL3Q9BY60 117 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 METTL8Q9H825 291 aaKnown RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 TREM1Q9NP99 234 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 AKIP1Q9NQ31 210 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 RASD1Q9Y272 281 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 SNX11Q9Y5W9 270 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 TMEM14AQ9Y6G1 99 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 ASPDHA6ND91 283 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 NCR1O76036 304 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 KAT7O95251 611 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 AHSA1O95433 338 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 ENTPD8Q5MY95 495 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 KCTD9Q7L273 389 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 ZNF619Q8N2I2 560 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 YIPF6Q96EC8 236 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 OR7D2Q96RA2 312 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 ORAI3Q9BRQ5 295 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 HPF1Q9NWY4 346 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 GATBO75879 557 aaKnown RBP16.4■□□□□ 0.22
PTPRU-202ENST00000373779 SLCO2B1O94956 709 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 PEX11BO96011 259 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 IGFBP4P22692 258 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 PSMB5P28074 263 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 NTHL1P78549 312 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 TSPAN31Q12999 210 aa16.4■□□□□ 0.22
PTPRU-202ENST00000373779 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.39■□□□□ 0.21
PTPRU-202ENST00000373779 KCNJ13O60928 360 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms