RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 SPTBP11277 2137 aa18.58■□□□□ 0.56
CRLF3-201ENST00000324238 EVX1P49640 407 aa18.58■□□□□ 0.56
CRLF3-201ENST00000324238 KHKP50053 298 aa18.58■□□□□ 0.56
CRLF3-201ENST00000324238 AGERQ15109 404 aa18.58■□□□□ 0.56
CRLF3-201ENST00000324238 TMEM91Q6ZNR0 172 aa18.58■□□□□ 0.56
CRLF3-201ENST00000324238 FBXL6Q8N531 539 aa18.58■□□□□ 0.56
CRLF3-201ENST00000324238 AP3S1Q92572 193 aa18.58■□□□□ 0.56
CRLF3-201ENST00000324238 RBFOX1Q9NWB1 397 aaKnown RBP18.58■□□□□ 0.56
CRLF3-201ENST00000324238 ALPK2Q86TB3 2170 aa18.58■□□□□ 0.56
CRLF3-201ENST00000324238 C17orf113A0A1B0GUU1 675 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 MID1O15344 667 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 ADH1CP00326 375 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 SHC1P29353 583 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 RGS8P57771 180 aaPredicted RBP18.57■□□□□ 0.56
CRLF3-201ENST00000324238 TGM3Q08188 693 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 CAMK2BQ13554 666 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 SLC9A5Q14940 896 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 PLEKHM3Q6ZWE6 761 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 SLC16A11Q8NCK7 471 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 BADQ92934 168 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 QRFPRQ96P65 431 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 CAPN10Q9HC96 672 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 FGF20Q9NP95 211 aaPredicted RBP18.57■□□□□ 0.56
CRLF3-201ENST00000324238 ACOXLQ9NUZ1 547 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 SPHK1Q9NYA1 384 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 LIPT1Q9Y234 373 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 SDK1Q7Z5N4 2213 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 E9PI62 339 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 GKN3PP0CG01 181 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 TFPIP10646 304 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 OMPP47874 163 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 CDK3Q00526 305 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 ELAVL3Q14576 367 aaKnown RBP18.57■□□□□ 0.56
CRLF3-201ENST00000324238 RPTNQ6XPR3 784 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 GET4Q7L5D6 327 aaPredicted RBP18.57■□□□□ 0.56
CRLF3-201ENST00000324238 KRT74Q7RTS7 529 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 C16orf62Q7Z3J2 963 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 ACSS1Q9NUB1 689 aaPredicted RBP18.57■□□□□ 0.56
CRLF3-201ENST00000324238 GPR34Q9UPC5 381 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 A0A0B4J203 849 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 STK25O00506 426 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 DNAJB6O75190 326 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 ALX3O95076 343 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 PRKAR1AP10644 381 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 ADGRD2Q7Z7M1 963 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 ZNF485Q8NCK3 441 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 NUP43Q8NFH3 380 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 OR2A1Q8NGT9 310 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 PHF21AQ96BD5 680 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 ZNF514Q96K75 400 aaPredicted RBP18.57■□□□□ 0.56
CRLF3-201ENST00000324238 MCHR1Q99705 422 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 BEX1Q9HBH7 125 aa18.57■□□□□ 0.56
CRLF3-201ENST00000324238 PRG2P13727 222 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 MLLT3P42568 568 aaPredicted RBP18.56■□□□□ 0.56
CRLF3-201ENST00000324238 SEC13P55735 322 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 PPP3R1P63098 170 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 ABATP80404 500 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 METRNLQ641Q3 311 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 ARL9Q6T311 187 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 RD3Q7Z3Z2 195 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 TMEFF1Q8IYR6 380 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 ARIH2OSQ8N7S6 290 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 TMEM99Q8N816 258 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 KCT2Q8NC54 265 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 SLC37A3Q8NCC5 494 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 OR4M1Q8NGD0 313 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 LRIG1Q96JA1 1093 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 LINC00615Q96LM1 132 aaPredicted RBP18.56■□□□□ 0.56
CRLF3-201ENST00000324238 DPH1Q9BZG8 443 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 MAFFQ9ULX9 164 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 MRPS7Q9Y2R9 242 aaKnown RBP18.56■□□□□ 0.56
CRLF3-201ENST00000324238 CENPBD1B2RD01 187 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 ZNF780AO75290 641 aaPredicted RBP18.56■□□□□ 0.56
CRLF3-201ENST00000324238 ARSBP15848 533 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 CPN2P22792 545 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 RFX3P48380 749 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 REM2Q8IYK8 340 aaPredicted RBP18.56■□□□□ 0.56
CRLF3-201ENST00000324238 OR7G1Q8NGA0 311 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 GNPDA2Q8TDQ7 276 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 ZNF707Q96C28 371 aaPredicted RBP18.56■□□□□ 0.56
CRLF3-201ENST00000324238 TMEM43Q9BTV4 400 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 ATP13A2Q9NQ11 1180 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 WASH6PQ9NQA3 447 aa18.56■□□□□ 0.56
CRLF3-201ENST00000324238 MDC1Q14676 2089 aaKnown RBP18.55■□□□□ 0.56
CRLF3-201ENST00000324238 C12orf71A8MTZ7 269 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 SLC9A3R1O14745 358 aaPredicted RBP18.55■□□□□ 0.56
CRLF3-201ENST00000324238 SURF4O15260 269 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 AKAP8O43823 692 aaKnown RBP18.55■□□□□ 0.56
CRLF3-201ENST00000324238 SLC3A1Q07837 685 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 TSPAN31Q12999 210 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 FZD5Q13467 585 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 EOGTQ5NDL2 527 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 FAM205BPQ63HN1 556 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 C17orf50Q8WW18 174 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 DIO2Q92813 273 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 CHFRQ96EP1 664 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 OR51V1Q9H2C8 321 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 PELI2Q9HAT8 420 aa18.55■□□□□ 0.56
CRLF3-201ENST00000324238 H2AFY2Q9P0M6 372 aaPredicted RBP18.55■□□□□ 0.56
CRLF3-201ENST00000324238 SLC7A7Q9UM01 511 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms