RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 INSM1Q01101 510 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 LARS2Q15031 903 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 C6orf52Q5T4I8 152 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 CYP4Z1Q86W10 505 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 VRK2Q86Y07 508 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 SLC2A12Q8TD20 617 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 GABARAPL1Q9H0R8 117 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 TESMINQ9Y4I5 508 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 ZNF318Q5VUA4 2279 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 AGAP5A6NIR3 686 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 TNFRSF11BO00300 401 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 BRINP1O60477 761 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 EPPINO95925 133 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 IGKV3-11P04433 115 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 THBS1P07996 1170 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 GSTT1P30711 240 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 YAP1P46937 504 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 PPP2R2BQ00005 443 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 SPIBQ01892 262 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 GPR68Q15743 365 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 CDCP2Q5VXM1 449 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 FIGNL1Q6PIW4 674 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 HMGN2P46Q86SG4 172 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 HS3ST5Q8IZT8 346 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 ZNF721Q8TF20 911 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 RMND5BQ96G75 393 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 RDH12Q96NR8 316 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 OR8D2Q9GZM6 311 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 SMURF2Q9HAU4 748 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 KLHL28Q9NXS3 571 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 DTX4Q9Y2E6 619 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 LYVE1Q9Y5Y7 322 aa16.38■□□□□ 0.21
SHKBP1-224ENST00000600718 IDSB3KWA1 339 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 J3KTA2 159 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 KIAA0513O60268 411 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 FOXD2O60548 495 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 DBIP07108 87 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 CYC1P08574 325 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 CT45A8P0DMV1 189 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 CT45A9P0DMV2 189 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 PRKACGP22612 351 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 HMGA2P52926 109 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 EMP2P54851 167 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 CT45A2Q5DJT8 189 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 TCTN3Q6NUS6 607 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 SHISA6Q6ZSJ9 500 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 ZNF605Q86T29 641 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 MORN4Q8NDC4 146 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 OR4D11Q8NGI4 311 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 VANGL1Q8TAA9 524 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 SOX17Q9H6I2 414 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 FBXO34Q9NWN3 711 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 PDP1Q9P0J1 537 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 ZNF443Q9Y2A4 671 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 GPR55Q9Y2T6 319 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 LOXL2Q9Y4K0 774 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 ALOX12BO75342 701 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 IL7RP16871 459 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 ZNF28P17035 718 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 TGM1P22735 817 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 PIGAP37287 484 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 PPICP45877 212 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 RAB15P59190 212 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 MERTKQ12866 999 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 ISXQ2M1V0 245 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 DCAF12Q5T6F0 453 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 LCN10Q6JVE6 187 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 NPSR1Q6W5P4 371 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 COMTD1Q86VU5 262 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 OR4C15Q8NGM1 316 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 METTL21AQ8WXB1 218 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 TFAP2CQ92754 450 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 ARHGDIGQ99819 225 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 G6PC3Q9BUM1 346 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 ITPAQ9BY32 194 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 WDR54Q9H977 334 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 ACER3Q9NUN7 267 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 GPN3Q9UHW5 284 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 KCND3Q9UK17 655 aa16.37■□□□□ 0.21
SHKBP1-224ENST00000600718 M0R3H8 397 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 UBTFL6P0CB48 400 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 THRBP10828 461 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 CDH12P55289 794 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 SMIM11AP58511 58 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 CNPY1Q3B7I2 92 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 EIPR1Q53HC9 387 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 MRPL14Q6P1L8 145 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 ANKRD37Q7Z713 158 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 PIP4P1Q86T03 277 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 RBM45Q8IUH3 476 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 LACC1Q8IV20 430 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 MARVELD2Q8N4S9 558 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 DHRSXQ8N5I4 330 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 ZNF321PQ8N8H1 164 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 LIN37Q96GY3 246 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 ZPBPQ9BS86 351 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 NUDT9Q9BW91 350 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 ULBP3Q9BZM4 244 aa16.36■□□□□ 0.21
SHKBP1-224ENST00000600718 NXT1Q9UKK6 140 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms