RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 AMBRA1Q9C0C7 1298 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 VCXQ9H320 206 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 Q9N2J8 555 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 VNN3Q9NY84 501 aa19.28■□□□□ 0.68
PNKP-203ENST00000593946 C9orf172C9J069 976 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 PDLIM1O00151 329 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 DLGAP3O95886 979 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 IFNW1P05000 195 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 ITGA2P17301 1181 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 RPS4Y1P22090 263 aaKnown RBP19.27■□□□□ 0.68
PNKP-203ENST00000593946 GPR143P51810 404 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 IST1P53990 364 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 ZNF311Q5JNZ3 666 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 CBR4Q8N4T8 237 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 OR52P1PQ8NH57 321 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 WDR36Q8NI36 951 aaKnown RBP19.27■□□□□ 0.68
PNKP-203ENST00000593946 MESP1Q9BRJ9 268 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 SPRY4Q9C004 299 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 COPS7AQ9UBW8 275 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 IFT52Q9Y366 437 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 AK5Q9Y6K8 562 aa19.27■□□□□ 0.68
PNKP-203ENST00000593946 IGHV3-20A0A0C4DH32 117 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 SPAARA0A1B0GVQ0 90 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 AGAP5A6NIR3 686 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 SAGE2PA6NJ88 616 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 SYT5O00445 386 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 LGI1O95970 557 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 PRKAR1BP31321 381 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 PIGAP37287 484 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 PPICP45877 212 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 GPR68Q15743 365 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 DHRS4L2Q6PKH6 230 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 VRK2Q86Y07 508 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 PEX5LQ8IYB4 626 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 GALNT4Q8N4A0 578 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 PACRGLQ8N7B6 248 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 ZNF347Q96SE7 839 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 C8orf4Q9NR00 106 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 PPIEQ9UNP9 301 aaKnown RBP19.26■□□□□ 0.67
PNKP-203ENST00000593946 ENPP4Q9Y6X5 453 aa19.26■□□□□ 0.67
PNKP-203ENST00000593946 KLF7O75840 302 aaPredicted RBP19.25■□□□□ 0.67
PNKP-203ENST00000593946 RASAL1O95294 804 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 IGKV1D-16P01601 117 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 CSRP1P21291 193 aaKnown RBP19.25■□□□□ 0.67
PNKP-203ENST00000593946 EBPQ15125 230 aaKnown RBP19.25■□□□□ 0.67
PNKP-203ENST00000593946 NNATQ16517 81 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 NRF1Q16656 503 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 C3orf38Q5JPI3 329 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 ASCL5Q7RTU5 278 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 TMEM179BQ7Z7N9 219 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 ZAR1Q86SH2 424 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 CARM1Q86X55 608 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 C9orf40Q8IXQ3 194 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 SVOPLQ8N434 492 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 NFAM1Q8NET5 270 aaPredicted RBP19.25■□□□□ 0.67
PNKP-203ENST00000593946 ADIPOR1Q96A54 375 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 WDR77Q9BQA1 342 aaPredicted RBP19.25■□□□□ 0.67
PNKP-203ENST00000593946 WFDC6Q9BQY6 131 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 TRIM45Q9H8W5 580 aaPredicted RBP19.25■□□□□ 0.67
PNKP-203ENST00000593946 CBLCQ9ULV8 474 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 ZNF443Q9Y2A4 671 aaPredicted RBP19.25■□□□□ 0.67
PNKP-203ENST00000593946 CHST2Q9Y4C5 530 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 PTPRBP23467 1997 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 CENPVL1A0A0U1RR11 272 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 OR6C76A6NM76 312 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 H0YJX3 145 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 DNAJB5O75953 348 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 THBS1P07996 1170 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 DCTP40126 519 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 C6orf15Q6UXA7 325 aaPredicted RBP19.25■□□□□ 0.67
PNKP-203ENST00000593946 CPEB2Q7Z5Q1 589 aaKnown RBP19.25■□□□□ 0.67
PNKP-203ENST00000593946 ZDHHC13Q8IUH4 622 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 OR4D11Q8NGI4 311 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 OR5K1Q8NHB7 308 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 PHOX2BQ99453 314 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 SEMA4CQ9C0C4 833 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 C19orf25Q9UFG5 118 aaPredicted RBP19.25■□□□□ 0.67
PNKP-203ENST00000593946 KCNE5Q9UJ90 142 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 PADI1Q9ULC6 663 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 SLC9A8Q9Y2E8 581 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 OR10H1Q9Y4A9 318 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 U3KQV3 271 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 AHCTF1Q8WYP5 2266 aa19.25■□□□□ 0.67
PNKP-203ENST00000593946 FRG2CA6NGY1 282 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 G3V2T6 193 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 ADAMDEC1O15204 470 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 E2F6O75461 281 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 UMODP07911 640 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 RHCEP18577 417 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 DRD5P21918 477 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 DCAF7P61962 342 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 PPP1R8Q12972 351 aaKnown RBP19.24■□□□□ 0.67
PNKP-203ENST00000593946 MAPK14Q16539 360 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 FAM69BQ5VUD6 431 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 PAPD4Q6PIY7 484 aaKnown RBP19.24■□□□□ 0.67
PNKP-203ENST00000593946 TBPL2Q6SJ96 375 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 TIPARPQ7Z3E1 657 aaKnown RBP19.24■□□□□ 0.67
PNKP-203ENST00000593946 LACC1Q8IV20 430 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 CACTIN-AS1Q8N1I8 211 aa19.24■□□□□ 0.67
PNKP-203ENST00000593946 BCORP1Q8N888 145 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms