RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 DLL4Q9NR61 685 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 KIF25Q9UIL4 384 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 NPTNQ9Y639 398 aa16.52■□□□□ 0.24
RAB40C-205ENST00000539661 PRAMEF27A3QJZ7 478 aa16.52■□□□□ 0.23
RAB40C-205ENST00000539661 SURF4O15260 269 aa16.52■□□□□ 0.23
RAB40C-205ENST00000539661 CD53P19397 219 aa16.52■□□□□ 0.23
RAB40C-205ENST00000539661 MEF2AQ02078 507 aaPredicted RBP16.52■□□□□ 0.23
RAB40C-205ENST00000539661 MLC1Q15049 377 aa16.52■□□□□ 0.23
RAB40C-205ENST00000539661 FAM180BQ6P0A1 224 aa16.52■□□□□ 0.23
RAB40C-205ENST00000539661 GDPD4Q6W3E5 623 aa16.52■□□□□ 0.23
RAB40C-205ENST00000539661 ARL14EPQ8N8R7 260 aaPredicted RBP16.52■□□□□ 0.23
RAB40C-205ENST00000539661 ZNF461Q8TAF7 563 aa16.52■□□□□ 0.23
RAB40C-205ENST00000539661 BCL7CQ8WUZ0 217 aaPredicted RBP16.52■□□□□ 0.23
RAB40C-205ENST00000539661 SORBS1Q9BX66 1292 aaKnown RBP16.52■□□□□ 0.23
RAB40C-205ENST00000539661 ACSS1Q9NUB1 689 aaPredicted RBP16.52■□□□□ 0.23
RAB40C-205ENST00000539661 SERPINI2O75830 405 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 ABLIM3O94929 683 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 HOXD4P09016 255 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-205ENST00000539661 ATF4P18848 351 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-205ENST00000539661 F8A1P23610 371 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 IL32P24001 234 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 GSG1Q2KHT4 349 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 TPGS2Q68CL5 300 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 CMIPQ8IY22 773 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 KRT78Q8N1N4 520 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 TOMM5Q8N4H5 51 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 NUP210Q8TEM1 1887 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-205ENST00000539661 MRPS31Q92665 395 aaKnown RBP16.51■□□□□ 0.23
RAB40C-205ENST00000539661 SLC35G5Q96KT7 338 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 OR51I1Q9H343 314 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 ITM2BQ9Y287 266 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 PRRC2BQ5JSZ5 2229 aaKnown RBP16.51■□□□□ 0.23
RAB40C-205ENST00000539661 PLPP1O14494 284 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 EPPINO95925 133 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 URODP06132 367 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 C4BPBP20851 252 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 CST5P28325 142 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-205ENST00000539661 LYPD4Q6UWN0 246 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 OR6C4Q8NGE1 309 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 GLYATL1Q969I3 302 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 LMLNQ96KR4 655 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 ERMAPQ96PL5 475 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-205ENST00000539661 ABHD1Q96SE0 405 aa16.51■□□□□ 0.23
RAB40C-205ENST00000539661 SLC9A3R1O14745 358 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-205ENST00000539661 KHNYNO15037 678 aaKnown RBP16.5■□□□□ 0.23
RAB40C-205ENST00000539661 STAT5AP42229 794 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 GBX2P52951 348 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-205ENST00000539661 TMEM115Q12893 351 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-205ENST00000539661 FZD5Q13467 585 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 GNA13Q14344 377 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 TRAM2Q15035 370 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 TRAM1Q15629 374 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 TCTN1Q2MV58 587 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 GARNL3Q5VVW2 1013 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 CDC73Q6P1J9 531 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 BTN2A1Q7KYR7 527 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 TECPR1Q7Z6L1 1165 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 PINK1Q9BXM7 581 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 CACNG6Q9BXT2 260 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 MRPL9Q9BYD2 267 aaKnown RBP16.5■□□□□ 0.23
RAB40C-205ENST00000539661 ANKRD19PQ9H560 264 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 CKAP5Q14008 2032 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 J3QRE1 110 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 SNAPC5O75971 98 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 H2AFB2P0C5Z0 115 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 EPHA5P54756 1037 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 PITPNAQ00169 270 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 ZNF658BQ4V348 819 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-205ENST00000539661 KIAA1161Q6NSJ0 714 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 SFXN4Q6P4A7 337 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 TMEM220Q6QAJ8 160 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 B3GLCTQ6Y288 498 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 HTR3DQ70Z44 454 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-205ENST00000539661 PCSK9Q8NBP7 692 aaKnown RBP16.5■□□□□ 0.23
RAB40C-205ENST00000539661 ZNF740Q8NDX6 193 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 SRFBP1Q8NEF9 429 aaKnown RBP16.5■□□□□ 0.23
RAB40C-205ENST00000539661 XAGE5Q8WWM1 108 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 TMEM168Q9H0V1 697 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 EPHX3Q9H6B9 360 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 BABAM2Q9NXR7 383 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 SLC25A13Q9UJS0 675 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 RASD1Q9Y272 281 aa16.5■□□□□ 0.23
RAB40C-205ENST00000539661 SPTBN5Q9NRC6 3674 aaKnown RBP16.5■□□□□ 0.23
RAB40C-205ENST00000539661 LOC105369274A0A096LPK9 316 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 A0A1W2PPL8 197 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 PI15O43692 258 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 ZP3P21754 424 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 TRIM23P36406 574 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 ATP6V1E1P36543 226 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 MMP15P51511 669 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 KHDRBS2Q5VWX1 349 aaKnown RBP16.49■□□□□ 0.23
RAB40C-205ENST00000539661 ASPGQ86U10 573 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 OR4N4Q8N0Y3 316 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 UXS1Q8NBZ7 420 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 CEP76Q8TAP6 659 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 SUN3Q8TAQ9 357 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 PIGXQ8TBF5 258 aa16.49■□□□□ 0.23
RAB40C-205ENST00000539661 ZNF689Q96CS4 500 aaPredicted RBP16.49■□□□□ 0.23
RAB40C-205ENST00000539661 COQ3Q9NZJ6 369 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms