RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	C17orf58	Q2M2W7	97 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	TMEM44	Q2T9K0	475 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	VWA2	Q5GFL6	755 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	CFAP157	Q5JU67	520 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	CEP85L	Q5SZL2	805 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	SPATA46	Q5T0L3	261 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	SEL1L2	Q5TEA6	688 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	GFI1B	Q5VTD9	330 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	BLOC1S2	Q6QNY1	142 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	RGS9BP	Q6ZS82	235 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	CYS1	Q717R9	158 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	PRSS48	Q7RTY5	328 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	LRRC49	Q8IUZ0	686 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	ARL14	Q8N4G2	192 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	CSNK1G2-AS1	Q8NCQ2	148 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	OR52M1	Q8NGK5	317 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	FNDC8	Q8TC99	324 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	TADA1	Q96BN2	335 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	C11orf24	Q96F05	449 aa	Predicted RBP	3.18	□□□□□ -1.9
RDX-208	ENST00000530085	DHTKD1	Q96HY7	919 aa	Predicted RBP	3.18	□□□□□ -1.9
RDX-208	ENST00000530085	AKR1E2	Q96JD6	320 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	SLC25A51	Q9H1U9	297 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	RHOJ	Q9H4E5	214 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	HEXA-AS1	Q9H8Q6	139 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	GORASP2	Q9H8Y8	452 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	PANK3	Q9H999	370 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	UTP6	Q9NYH9	597 aa	Known RBP	3.18	□□□□□ -1.9
RDX-208	ENST00000530085	RAI14	Q9P0K7	980 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	MRPS7	Q9Y2R9	242 aa	Known RBP	3.18	□□□□□ -1.9
RDX-208	ENST00000530085	MAB21L2	Q9Y586	359 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	DDX49	Q9Y6V7	483 aa	Known RBP	3.18	□□□□□ -1.9
RDX-208	ENST00000530085	NISCH	Q9Y2I1	1504 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	KIF16B	Q96L93	1317 aa		3.18	□□□□□ -1.9
RDX-208	ENST00000530085	OBSCN	Q5VST9	7968 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	PPIAL4C	A0A0B4J2A2	164 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	TRBV7-9	A0A0J9YWB2	115 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	ESYT2	A0FGR8	921 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	CLRN2	A0PK11	232 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085		K7EQM0	130 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	RIPK2	O43353	540 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	PPIH	O43447	177 aa	Known RBP	3.17	□□□□□ -1.9
RDX-208	ENST00000530085	TM7SF2	O76062	418 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	KIAA0754	O94854	1291 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	MT-ND1	P03886	318 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	OPN1LW	P04000	364 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	IQCF3	P0C7M6	154 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	PPIAL4G	P0DN37	164 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	ANXA3	P12429	323 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	H2AFX	P16104	143 aa	Predicted RBP	3.17	□□□□□ -1.9
RDX-208	ENST00000530085	XRCC1	P18887	633 aa	Predicted RBP	3.17	□□□□□ -1.9
RDX-208	ENST00000530085	BRCC3	P46736	316 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	RGS4	P49798	205 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	EMD	P50402	254 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	CSRP3	P50461	194 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	ARHGDIA	P52565	204 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	GBX2	P52951	348 aa	Predicted RBP	3.17	□□□□□ -1.9
RDX-208	ENST00000530085	METAP1	P53582	386 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	ACTR1A	P61163	376 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	SPIB	Q01892	262 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	FCHO2	Q0JRZ9	810 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	MRGPRG-AS1	Q2M3A8	158 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	C14orf28	Q4W4Y0	310 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	C14orf177	Q52M58	125 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	MS4A13	Q5J8X5	152 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	OTUD3	Q5T2D3	398 aa	Predicted RBP	3.17	□□□□□ -1.9
RDX-208	ENST00000530085	SLX4IP	Q5VYV7	408 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	ZNF343	Q6P1L6	599 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	ZNF497	Q6ZNH5	498 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	TMUB2	Q71RG4	321 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	VASH2	Q86V25	355 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	PARG	Q86W56	976 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	SPEM1	Q8N4L4	309 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	NANP	Q8TBE9	248 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	PNPT1	Q8TCS8	783 aa	Known RBP	3.17	□□□□□ -1.9
RDX-208	ENST00000530085	SPRYD4	Q8WW59	207 aa	Predicted RBP	3.17	□□□□□ -1.9
RDX-208	ENST00000530085	CRYGN	Q8WXF5	182 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	NR4A3	Q92570	626 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	C18orf25	Q96B23	403 aa	Predicted RBP	3.17	□□□□□ -1.9
RDX-208	ENST00000530085	SENP8	Q96LD8	212 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	ZNF599	Q96NL3	588 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	ZNF607	Q96SK3	696 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	FEM1A	Q9BSK4	669 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	ALG12	Q9BV10	488 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	NFKBIZ	Q9BYH8	718 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	MEAF6	Q9HAF1	191 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	BARX2	Q9UMQ3	279 aa	Predicted RBP	3.17	□□□□□ -1.9
RDX-208	ENST00000530085	SMC3	Q9UQE7	1217 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	RNF24	Q9Y225	148 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	GSTK1	Q9Y2Q3	226 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	OR10H1	Q9Y4A9	318 aa		3.17	□□□□□ -1.9
RDX-208	ENST00000530085	IGHV3OR16-12	A0A075B7B8	117 aa		3.16	□□□□□ -1.9
RDX-208	ENST00000530085		A0A1W2PPR1	153 aa		3.16	□□□□□ -1.9
RDX-208	ENST00000530085	GSAP	A4D1B5	854 aa		3.16	□□□□□ -1.9
RDX-208	ENST00000530085	FAM74A7	A6NL05	159 aa		3.16	□□□□□ -1.9
RDX-208	ENST00000530085	RAMP1	O60894	148 aa		3.16	□□□□□ -1.9
RDX-208	ENST00000530085	BCAS1	O75363	584 aa	Predicted RBP	3.16	□□□□□ -1.9
RDX-208	ENST00000530085	NEBL	O76041	1014 aa		3.16	□□□□□ -1.9
RDX-208	ENST00000530085	B3GAT3	O94766	335 aa		3.16	□□□□□ -1.9
RDX-208	ENST00000530085	RHOBTB1	O94844	696 aa		3.16	□□□□□ -1.9
RDX-208	ENST00000530085	JCHAIN	P01591	159 aa		3.16	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms