RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ELAVL4P26378 380 aaKnown RBP16.65■□□□□ 0.26
VEGFA-222ENST00000520948 GABRA3P34903 492 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 PNLIPRP2P54317 469 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 TP53BP2Q13625 1128 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 LASP1Q14847 261 aaKnown RBP16.65■□□□□ 0.26
VEGFA-222ENST00000520948 ZNHIT3Q15649 155 aaPredicted RBP16.65■□□□□ 0.26
VEGFA-222ENST00000520948 DUSP5Q16690 384 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 SPDYE7PQ495Y7 208 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 LRIF1Q5T3J3 769 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 BHLHB9Q6PI77 547 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 SLC2A7Q6PXP3 512 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 ZNF621Q6ZSS3 439 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 NUP54Q7Z3B4 507 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 PSD4Q8NDX1 1056 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 TMBIM1Q969X1 311 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 RELTQ969Z4 430 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 OMA1Q96E52 524 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 STACQ99469 402 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 SLC35A5Q9BS91 424 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 YIPF4Q9BSR8 244 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 NMUR2Q9GZQ4 415 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 PIGUQ9H490 435 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 DUSP22Q9NRW4 184 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 SH3BGRL2Q9UJC5 107 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 CBLCQ9ULV8 474 aa16.65■□□□□ 0.26
VEGFA-222ENST00000520948 RNF103-CHMP3A0A140T963 221 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 GXYLT2A0PJZ3 443 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 SLC22A2O15244 555 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 GSNP06396 782 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 SNRPB2P08579 225 aaKnown RBP16.64■□□□□ 0.25
VEGFA-222ENST00000520948 ALOX5P09917 674 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 CCL3P10147 92 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 MST1P26927 711 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 SOAT1P35610 550 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 PIGAP37287 484 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 TMED10P49755 219 aaKnown RBP16.64■□□□□ 0.25
VEGFA-222ENST00000520948 FBXW4P57775 412 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 INAQ16352 499 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 SLC22A10Q63ZE4 541 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 DESI1Q6ICB0 168 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 TMEM81Q6P7N7 255 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 SZRD1Q7Z422 152 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 TRIML2Q8N7C3 387 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 SPPL2AQ8TCT8 520 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 ZFP90Q8TF47 636 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 ITLN2Q8WWU7 325 aaPredicted RBP16.64■□□□□ 0.25
VEGFA-222ENST00000520948 PIK3R3Q92569 461 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 SLC9A6Q92581 669 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 TMEM125Q96AQ2 219 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 CCT8L2Q96SF2 557 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 SECISBP2Q96T21 854 aaKnown RBP16.64■□□□□ 0.25
VEGFA-222ENST00000520948 MYLK2Q9H1R3 596 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 PROK2Q9HC23 129 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 Q9N2J8 555 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 TIMMDC1Q9NPL8 285 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 DEPPQ9NTK1 212 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 SLAMF8Q9P0V8 285 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 CNOT11Q9UKZ1 510 aaKnown RBP16.64■□□□□ 0.25
VEGFA-222ENST00000520948 PCDHB14Q9Y5E9 798 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 GMEB1Q9Y692 573 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 KCNE3Q9Y6H6 103 aa16.64■□□□□ 0.25
VEGFA-222ENST00000520948 TEP1Q99973 2627 aaKnown RBP16.64■□□□□ 0.25
VEGFA-222ENST00000520948 A0A096LPI6 279 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 ANKRD33BA6NCL7 494 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 OR6C70A6NIJ9 312 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 CCDC22O60826 627 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 UGT2B11O75310 529 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 REM1O75628 298 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 IL33O95760 270 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 IGKV1D-16P01601 117 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 POU3F2P20265 443 aaPredicted RBP16.63■□□□□ 0.25
VEGFA-222ENST00000520948 CNR1P21554 472 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 MATN1P21941 496 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 MVDP53602 400 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 PMP22Q01453 160 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 PLCXD2Q0VAA5 305 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 GTDC1Q4AE62 458 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 AP1ARQ63HQ0 302 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 GALNTL5Q7Z4T8 443 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 RETREG3Q86VR2 466 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 SULF2Q8IWU5 870 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 DPP10Q8N608 796 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 TMEM178AQ8NBL3 297 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 OR10G3Q8NGC4 313 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 GPR151Q8TDV0 419 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 RNF138Q8WVD3 245 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 DIO2Q92813 273 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 CCDC120Q96HB5 630 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 OR7D2Q96RA2 312 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 CCDC106Q9BWC9 280 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 KLHL1Q9NR64 748 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 CNIH4Q9P003 139 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 SUCOQ9UBS9 1254 aaKnown RBP16.63■□□□□ 0.25
VEGFA-222ENST00000520948 FAF1Q9UNN5 650 aaPredicted RBP16.63■□□□□ 0.25
VEGFA-222ENST00000520948 NDUFAF1Q9Y375 327 aa16.63■□□□□ 0.25
VEGFA-222ENST00000520948 TRBV5-3A0A0A0MS03 114 aa16.62■□□□□ 0.25
VEGFA-222ENST00000520948 CCL21O00585 134 aa16.62■□□□□ 0.25
VEGFA-222ENST00000520948 FBP2O00757 339 aa16.62■□□□□ 0.25
VEGFA-222ENST00000520948 TP53I11O14683 189 aa16.62■□□□□ 0.25
VEGFA-222ENST00000520948 ABCB7O75027 752 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms