RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 C16orf58Q96GQ5 468 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.68□□□□□ -1.66
PTPN13-209ENST00000511467 UCKL1Q9NWZ5 548 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 SPHK1Q9NYA1 384 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 ZNF107Q9UII5 783 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-209ENST00000511467 INTS6Q9UL03 887 aaKnown RBP4.68□□□□□ -1.66
PTPN13-209ENST00000511467 TLR4O00206 839 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 RRP8O43159 456 aaKnown RBP4.68□□□□□ -1.66
PTPN13-209ENST00000511467 ERI3O43414 337 aaKnown RBP4.68□□□□□ -1.66
PTPN13-209ENST00000511467 TIPRLO75663 272 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 BMP1P13497 986 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 TMEM201Q5SNT2 666 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 GHDCQ8N2G8 530 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 SMG8Q8ND04 991 aaKnown RBP4.68□□□□□ -1.66
PTPN13-209ENST00000511467 SPATA22Q8NHS9 363 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 NDRG1Q92597 394 aaKnown RBP4.68□□□□□ -1.66
PTPN13-209ENST00000511467 ADAM7Q9H2U9 754 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 AKTIPQ9H8T0 292 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 AGPAT4Q9NRZ5 378 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 LPAR3Q9UBY5 353 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 SLC7A8Q9UHI5 535 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 OR1A2Q9Y585 309 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 ENPP4Q9Y6X5 453 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 EXPH5Q8NEV8 1989 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 ABLIM3O94929 683 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 NDUFB2O95178 105 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 STBD1O95210 358 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 IL1AP01583 271 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 HBE1P02100 147 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 GLB1P16278 677 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 ELAVL4P26378 380 aaKnown RBP4.68□□□□□ -1.66
PTPN13-209ENST00000511467 LIPAP38571 399 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 CXCL12P48061 93 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 DSC2Q02487 901 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 PET117Q6UWS5 81 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 LAYNQ6UX15 382 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 C7orf61Q8IZ16 206 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 NEK7Q8TDX7 302 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 MAL2Q969L2 176 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 FGGYQ96C11 551 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 DIRAS2Q96HU8 199 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 BOD1Q96IK1 185 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 ALPK1Q96QP1 1244 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 OR11A1Q9GZK7 315 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 HIPK2Q9H2X6 1198 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 CXorf21Q9HAI6 301 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 PATZ1Q9HBE1 687 aaKnown RBP4.68□□□□□ -1.66
PTPN13-209ENST00000511467 SLC17A5Q9NRA2 495 aa4.68□□□□□ -1.66
PTPN13-209ENST00000511467 MED13LQ71F56 2210 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 BTN3A3O00478 584 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 KHNYNO15037 678 aaKnown RBP4.67□□□□□ -1.66
PTPN13-209ENST00000511467 COCHO43405 550 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 TBX19O60806 448 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 NMBRP28336 390 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 PSMB10P40306 273 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 EIF2B2P49770 351 aaKnown RBP4.67□□□□□ -1.66
PTPN13-209ENST00000511467 NFATC4Q14934 902 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 PODNL1Q6PEZ8 512 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 DPY19L2P2Q6ZN68 376 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 NUFIP2Q7Z417 695 aaKnown RBP4.67□□□□□ -1.66
PTPN13-209ENST00000511467 PDSS2Q86YH6 399 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 SGTBQ96EQ0 304 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 LENG8Q96PV6 779 aaPredicted RBP4.67□□□□□ -1.66
PTPN13-209ENST00000511467 SLC25A31Q9H0C2 315 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 RHOFQ9HBH0 211 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 RNF186Q9NXI6 227 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 FTSJ1Q9UET6 329 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 MED13Q9UHV7 2174 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 GPR39O43194 453 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 ZNF749O43361 778 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 CD3GP09693 182 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 PTAFRP25105 342 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 SLC5A2P31639 672 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 POLR2HP52434 150 aaKnown RBP4.67□□□□□ -1.66
PTPN13-209ENST00000511467 EARS2Q5JPH6 523 aaKnown RBP4.67□□□□□ -1.66
PTPN13-209ENST00000511467 C6orf136Q5SQH8 315 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 FRMPD2BQ6IN97 320 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 SLC39A4Q6P5W5 647 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 GOLGA7Q7Z5G4 137 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 TSPAN33Q86UF1 283 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 SLCO6A1Q86UG4 719 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 PTRH1Q86Y79 214 aaKnown RBP4.67□□□□□ -1.66
PTPN13-209ENST00000511467 UBQLNLQ8IYU4 475 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 RDH10Q8IZV5 341 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 NAGSQ8N159 534 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 FAM109AQ8N4B1 249 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 SLC9A6Q92581 669 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 NEURL3Q96EH8 262 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 CMSS1Q9BQ75 279 aaKnown RBP4.67□□□□□ -1.66
PTPN13-209ENST00000511467 NMUR2Q9GZQ4 415 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 EGLN1Q9GZT9 426 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 NDRG4Q9ULP0 352 aaKnown RBP4.67□□□□□ -1.66
PTPN13-209ENST00000511467 S100PP25815 95 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 HTR2AP28223 471 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 SUB1P53999 127 aaKnown RBP eCLIP4.67□□□□□ -1.66
PTPN13-209ENST00000511467 UBE2NP61088 152 aaKnown RBP4.67□□□□□ -1.66
PTPN13-209ENST00000511467 TMEM52BQ4KMG9 183 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 ENPP7Q6UWV6 458 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 ZNF554Q86TJ5 538 aa4.67□□□□□ -1.66
PTPN13-209ENST00000511467 LGI4Q8N135 537 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms