RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 C19orf25Q9UFG5 118 aaPredicted RBP4.62□□□□□ -1.67
R3HDM1-216ENST00000483065 HMGXB4Q9UGU5 601 aa4.62□□□□□ -1.67
R3HDM1-216ENST00000483065 CYTH4Q9UIA0 394 aa4.62□□□□□ -1.67
R3HDM1-216ENST00000483065 IKZF3Q9UKT9 509 aa4.62□□□□□ -1.67
R3HDM1-216ENST00000483065 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.62□□□□□ -1.67
R3HDM1-216ENST00000483065 PCDHAC2Q9Y5I4 1007 aa4.62□□□□□ -1.67
R3HDM1-216ENST00000483065 SAR1BQ9Y6B6 198 aa4.62□□□□□ -1.67
R3HDM1-216ENST00000483065 A0A1W2PRD5 423 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 FBLL1A6NHQ2 334 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 C2CD4BA6NLJ0 364 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 LINC00473A8K010 186 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 ZNF732B4DXR9 585 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 TMEM178BH3BS89 294 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 ZW10O43264 779 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 HSBP1O75506 76 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 OR2J3O76001 311 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 FGF2P09038 288 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 UBCP0CG48 685 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 EGR2P11161 476 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 FGF5P12034 268 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 ANXA3P12429 323 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 NQO2P16083 231 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 NCK1P16333 377 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 CHRNB2P17787 502 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 POLR2CP19387 275 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 UGT1A4P22310 534 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 IL32P24001 234 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 GJB2P29033 226 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 IL12BP29460 328 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 PRDX3P30048 256 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 NPBWR2P48146 333 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 MRPL19P49406 292 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 EMDP50402 254 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 NOVA1P51513 510 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 EEF1A1P68104 462 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 NTHL1P78549 312 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 ZXDAP98168 799 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 ZFP36L1Q07352 338 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 ATXN7L3Q14CW9 347 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 SLC15A2Q16348 729 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 HAGHQ16775 308 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 LSM12Q3MHD2 195 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 EEF1A1P5Q5VTE0 462 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 SLX4IPQ5VYV7 408 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 DHRS11Q6UWP2 260 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 DEF8Q6ZN54 512 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 Q6ZNX1 250 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 C17orf107Q6ZR85 190 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 MRPL21Q7Z2W9 205 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 DCXRQ7Z4W1 244 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 PEG10Q86TG7 708 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 GPSM1Q86YR5 675 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 LRRC8AQ8IWT6 810 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 GPR65Q8IYL9 337 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 INO80EQ8NBZ0 244 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 FBXO36Q8NEA4 188 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 OR2L3Q8NG85 312 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 OSR1Q8TAX0 266 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 LRRC15Q8TF66 581 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 PELI1Q96FA3 418 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 SERAC1Q96JX3 654 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 C9orf72Q96LT7 481 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 CSPG4P5Q96PW8 444 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 SLC38A2Q96QD8 506 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 CNPY3Q9BT09 278 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 MEGF9Q9H1U4 602 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 CLK4Q9HAZ1 481 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 VCX3AQ9NNX9 186 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 FGF21Q9NSA1 209 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 ZNF275Q9NSD4 429 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 ZNF701Q9NV72 531 aaPredicted RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 SLC38A7Q9NVC3 462 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 SLC39A1Q9NY26 324 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 ZDHHC2Q9UIJ5 367 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 MAN1B1Q9UKM7 699 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 PRDM4Q9UKN5 801 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 PADI3Q9ULW8 664 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 PRPF19Q9UMS4 504 aaKnown RBP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 STUB1Q9UNE7 303 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 ST3GAL5Q9UNP4 418 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 AMDHD2Q9Y303 409 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 ADCY9O60503 1353 aa4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 AQRO60306 1485 aaKnown RBP eCLIP4.61□□□□□ -1.67
R3HDM1-216ENST00000483065 KCNE1BA0A087WTH5 132 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 A0A1B0GTI1 187 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 CCT8L1PA6NM43 557 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 CENPXA8MT69 81 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 A8MVM7 634 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 TCP10L2B9ZVM9 353 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 F5H6K3 240 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 ITGB1BP1O14713 200 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 SH2D1BO14796 132 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 RAB29O14966 203 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 RAD51BO15315 384 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 GPAA1O43292 621 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 KIAA0513O60268 411 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 HUS1O60921 280 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 GAGE7O76087 117 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 CCNB2O95067 398 aa4.6□□□□□ -1.67
R3HDM1-216ENST00000483065 FADS2O95864 444 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms