RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 KCNE3Q9Y6H6 103 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 ZSWIM8A7E2V4 1837 aa11.95□□□□□ -0.5
VPS52-218ENST00000482399 ZNF860A6NHJ4 632 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 PROM1O43490 865 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 OR7A10O76100 309 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 UBXN7O94888 489 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 ACADMP11310 421 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 PSMA3P25788 255 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 OPRD1P41143 372 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 PRLHRP49683 370 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 PCBP3P57721 371 aaKnown RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 RAB40BQ12829 278 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 STX4Q12846 297 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 SLC9A5Q14940 896 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 ANGPT1Q15389 498 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 ODF4Q2M2E3 257 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 LYPD4Q6UWN0 246 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 ZNF767PQ75MW2 155 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 PARS2Q7L3T8 475 aaKnown RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 COMMD7Q86VX2 200 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 RIT1Q92963 219 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 ORAI1Q96D31 301 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 NEURL3Q96EH8 262 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 A4GNTQ9UNA3 340 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 XIRP2A4UGR9 3374 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 C5orf42Q9H799 3197 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 SLC5A10A0PJK1 596 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 TGM5O43548 720 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 RFPL3O75679 317 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 LIMS3P0CW19 117 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 LIMS4P0CW20 117 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 PIPP12273 146 aaPredicted RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 SNRPBP14678 240 aaKnown RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 ZNF250P15622 560 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 GSTM3P21266 225 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 NAA10P41227 235 aaPredicted RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 EVX1P49640 407 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 KHKP50053 298 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 TSPAN5P62079 268 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 ST3GAL3Q11203 375 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 ZNF805Q5CZA5 627 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 TOR1AIP1Q5JTV8 583 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 TOR2AQ5JU69 321 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 PLPP4Q5VZY2 271 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 COMTD1Q86VU5 262 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 FTMTQ8N4E7 242 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 ACBD7Q8N6N7 88 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 ZNF655Q8N720 491 aaPredicted RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 MED30Q96HR3 178 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 NARS2Q96I59 477 aaKnown RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 ALG8Q9BVK2 526 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 GLIPR2Q9H4G4 154 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 C12orf4Q9NQ89 552 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 HS3ST2Q9Y278 367 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 LSM2Q9Y333 95 aaKnown RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 SCN2AQ99250 2005 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 IGLV3-16A0A075B6K0 115 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 KHDRBS3O75525 346 aaKnown RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 PROS1P07225 676 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 GRPRP30550 384 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 HMGA2P52926 109 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 TRAM2Q15035 370 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 TCTN1Q2MV58 587 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 PRPF38BQ5VTL8 546 aaKnown RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 SLC25A25Q6KCM7 469 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 ADGRF3Q8IZF5 1079 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 RAB42Q8N4Z0 105 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 FAM26EQ8N5C1 309 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 KREMEN2Q8NCW0 462 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 LYSMD1Q96S90 227 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 TMEM43Q9BTV4 400 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 OR10A4Q9H209 315 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 SLC35C2Q9NQQ7 365 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 GLTPQ9NZD2 209 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 AK6Q9Y3D8 172 aaKnown RBP11.94□□□□□ -0.5
VPS52-218ENST00000482399 CHST2Q9Y4C5 530 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 BACE2Q9Y5Z0 518 aa11.94□□□□□ -0.5
VPS52-218ENST00000482399 CA12O43570 354 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 RLN1P04808 185 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 CRYZQ08257 329 aaKnown RBP11.93□□□□□ -0.5
VPS52-218ENST00000482399 SNTB2Q13425 540 aaKnown RBP11.93□□□□□ -0.5
VPS52-218ENST00000482399 LTB4RQ15722 352 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 ESCO2Q56NI9 601 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 C6orf132Q5T0Z8 1188 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 HENMT1Q5T8I9 393 aaKnown RBP11.93□□□□□ -0.5
VPS52-218ENST00000482399 FAM83HQ6ZRV2 1179 aaPredicted RBP11.93□□□□□ -0.5
VPS52-218ENST00000482399 GET4Q7L5D6 327 aaPredicted RBP11.93□□□□□ -0.5
VPS52-218ENST00000482399 DGLUCYQ7Z3D6 616 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 CDK20Q8IZL9 346 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 TBC1D19Q8N5T2 526 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 MEIOBQ8N635 442 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 C10orf53Q8N6V4 93 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 FBXO15Q8NCQ5 510 aaPredicted RBP11.93□□□□□ -0.5
VPS52-218ENST00000482399 OR8D4Q8NGM9 314 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 OR9A2Q8NGT5 310 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 CXorf40AQ8TE69 158 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 TMEM255BQ8WV15 326 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 OR1A2Q9Y585 309 aa11.93□□□□□ -0.5
VPS52-218ENST00000482399 TBC1D3BA6NDS4 549 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms