RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ZNF630Q2M218 657 aaPredicted RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 RNF212Q495C1 297 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 MFSD14CQ5VZR4 134 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 ANGPTL8Q6UXH0 198 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 BEND4Q6ZU67 534 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 CAMKMTQ7Z624 323 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 DNAJB7Q7Z6W7 309 aaPredicted RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 SERPINA12Q8IW75 414 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 FBXO15Q8NCQ5 510 aaPredicted RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 OR52N2Q8NGI0 321 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 PNPLA2Q96AD5 504 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 RGMAQ96B86 450 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 MROH8Q9H579 483 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 C8orf33Q9H7E9 229 aaPredicted RBP13.02□□□□□ -0.33
HDAC1-206ENST00000476391 PLEKHM1Q9Y4G2 1056 aa13.02□□□□□ -0.33
HDAC1-206ENST00000476391 SCN8AQ9UQD0 1980 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 LCMT2O60294 686 aaKnown RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 CREBL2O60519 120 aaPredicted RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 SEMA7AO75326 666 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 TRBC1P01850 177 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 CNR1P21554 472 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 CCND3P30281 292 aaPredicted RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 CD79BP40259 229 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 PCBP3P57721 371 aaKnown RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 RAB5BP61020 215 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 MAT1AQ00266 395 aaKnown RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 EEF1A2Q05639 463 aaKnown RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 SOX4Q06945 474 aaPredicted RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 ELFN2Q5R3F8 820 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 COX20Q5RI15 118 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 CPTPQ5TA50 214 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 PGBD2Q6P3X8 592 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 SFXN4Q6P4A7 337 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 BAIAP2L2Q6UXY1 529 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 SLC36A4Q6YBV0 504 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 MOB3CQ70IA8 216 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 CBLN2Q8IUK8 224 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 IQCF1Q8N6M8 205 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 CELF5Q8N6W0 485 aaKnown RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 TRMT10AQ8TBZ6 339 aaKnown RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 PHOSPHO2Q8TCD6 241 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 HAVCR2Q8TDQ0 301 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 ZDHHC12Q96GR4 267 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 TINF2Q9BSI4 451 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 GPN1Q9HCN4 374 aaPredicted RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 TMEM161AQ9NX61 479 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 AKAP7Q9P0M2 348 aaPredicted RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 NFKBIL1Q9UBC1 381 aaPredicted RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 ENTPD4Q9Y227 616 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 TRBV23-1A0A0A0MS06 115 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 TMEM218A2RU14 115 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 NAP1L6A6NFF2 107 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 TTLL8A6PVC2 850 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 SNRPGP15A8MWD9 76 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 H7C0S8 307 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 CTDSPLO15194 276 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 GIPRP48546 466 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 LHX1P48742 406 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 LIM2P55344 173 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 GMFBP60983 142 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 SNRPEP62304 92 aaKnown RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 TEX30Q5JUR7 227 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 FUT10Q6P4F1 479 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 RBMS3Q6XE24 437 aaKnown RBP13.01□□□□□ -0.33
HDAC1-206ENST00000476391 TPRA1Q86W33 373 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 PKP4Q99569 1192 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 FUZQ9BT04 418 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 POLE3Q9NRF9 147 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 FBXL3Q9UKT7 428 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 FLVCR2Q9UPI3 526 aa13.01□□□□□ -0.33
HDAC1-206ENST00000476391 C5orf52A6NGY3 159 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 C2orf74A8MZ97 194 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 NEDD8-MDP1E9PL57 170 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 POP7O75817 140 aaKnown RBP13□□□□□ -0.33
HDAC1-206ENST00000476391 SPDEFO95238 335 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 EGFP01133 1207 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 UBBP0CG47 229 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 UBCP0CG48 685 aaKnown RBP13□□□□□ -0.33
HDAC1-206ENST00000476391 FOLR2P14207 255 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 MPGP29372 298 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 PGDP52209 483 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 RPS27AP62979 156 aaKnown RBP13□□□□□ -0.33
HDAC1-206ENST00000476391 UBA52P62987 128 aaKnown RBP13□□□□□ -0.33
HDAC1-206ENST00000476391 GINS1Q14691 196 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 NDUFA9Q16795 377 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 XKR4Q5GH76 650 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 PRAMEF18Q5VWM3 479 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 ZNF626Q68DY1 528 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 CD300LDQ6UXZ3 194 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 LHFPL3Q86UP9 236 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 MICALL2Q8IY33 904 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 KLHL36Q8N4N3 616 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 HDDC3Q8N4P3 179 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 OR51Q1Q8NH59 317 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 TMEM41AQ96HV5 264 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 ADGRE3Q9BY15 652 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 CIPCQ9C0C6 399 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 C1GALT1Q9NS00 363 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 C14orf105Q9NVL8 296 aa13□□□□□ -0.33
HDAC1-206ENST00000476391 PTGFRNQ9P2B2 879 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms